Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 MIR939-201ENST00000401314 82 ntBASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 TCF3P1-201ENST00000423021 1937 ntBASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 AC096631.2-201ENST00000436136 790 ntBASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 AC091305.1-201ENST00000479476 895 ntBASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 AL354811.1-201ENST00000610286 706 ntBASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHACTR1Q9C0D0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 AFG3L1P-217ENST00000557444 2447 ntBASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 AL355001.2-201ENST00000620617 1191 ntBASIC20.83■□□□□ 0.93
PHACTR1Q9C0D0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.83■□□□□ 0.92
PHACTR1Q9C0D0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 KRT87P-202ENST00000534226 1464 ntBASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 AC245052.3-201ENST00000450182 901 ntBASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 AC138907.5-202ENST00000569484 235 ntBASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PHACTR1Q9C0D0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms