Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 AC211429.1-201ENST00000415277 523 ntBASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 BX088651.1-201ENST00000540551 451 ntBASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 REXO1L12P-201ENST00000622156 912 ntBASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDH11XQ9BZA7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PCDH11XQ9BZA7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 TSPY7P-201ENST00000431358 1114 ntBASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 LINC01023-201ENST00000606054 436 ntBASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
PCDH11XQ9BZA7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 FAM210CP-201ENST00000445714 574 ntBASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 AL356652.1-201ENST00000615962 565 ntBASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 AC006557.6-201ENST00000623071 864 ntBASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 AL049637.2-201ENST00000641778 930 ntBASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.88■■□□□ 1.89
PCDH11XQ9BZA7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
PCDH11XQ9BZA7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 AC110285.5-201ENST00000611501 352 ntBASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDH11XQ9BZA7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 AL135905.2-201ENST00000584934 1404 ntBASIC26.85■■□□□ 1.89
PCDH11XQ9BZA7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 KRT17P2-201ENST00000300992 1314 ntBASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms