Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC005229.4-201ENST00000610085 2198 ntBASIC21.13■□□□□ 0.97
IFT43Q96FT9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 AC231657.2-201ENST00000624556 255 ntBASIC21.13■□□□□ 0.97
IFT43Q96FT9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IFT43Q96FT9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.13■□□□□ 0.97
IFT43Q96FT9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 KRT18P20-201ENST00000548986 1279 ntBASIC21.12■□□□□ 0.97
IFT43Q96FT9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 AC007952.6-201ENST00000573168 2673 ntBASIC21.12■□□□□ 0.97
IFT43Q96FT9 AC003957.1-201ENST00000625108 2673 ntBASIC21.12■□□□□ 0.97
IFT43Q96FT9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 KRT16P2-201ENST00000414673 1423 ntBASIC21.12■□□□□ 0.97
IFT43Q96FT9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
IFT43Q96FT9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IFT43Q96FT9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
IFT43Q96FT9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 AL049796.1-201ENST00000565336 1766 ntBASIC21.11■□□□□ 0.97
IFT43Q96FT9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.11■□□□□ 0.97
IFT43Q96FT9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IFT43Q96FT9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IFT43Q96FT9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IFT43Q96FT9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IFT43Q96FT9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 SLC7A5P2-201ENST00000553010 536 ntBASIC21.1■□□□□ 0.97
IFT43Q96FT9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 AL109923.1-201ENST00000618799 583 ntBASIC21.1■□□□□ 0.97
IFT43Q96FT9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IFT43Q96FT9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IFT43Q96FT9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.1■□□□□ 0.97
IFT43Q96FT9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 MIR663A-201ENST00000385250 93 ntBASIC21.09■□□□□ 0.97
IFT43Q96FT9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 MYCNOS-205ENST00000641950 531 ntBASIC21.09■□□□□ 0.97
IFT43Q96FT9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.09■□□□□ 0.97
IFT43Q96FT9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IFT43Q96FT9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IFT43Q96FT9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 GPX1P1-201ENST00000388829 606 ntBASIC21.08■□□□□ 0.97
IFT43Q96FT9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
IFT43Q96FT9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms