Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.99■■□□□ 1.11
SHC3Q92529 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.99■■□□□ 1.11
SHC3Q92529 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SHC3Q92529 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SHC3Q92529 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SHC3Q92529 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.98■■□□□ 1.11
SHC3Q92529 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SHC3Q92529 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
SHC3Q92529 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHC3Q92529 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.98■■□□□ 1.11
SHC3Q92529 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
SHC3Q92529 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC3Q92529 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC3Q92529 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SHC3Q92529 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHC3Q92529 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC3Q92529 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.97■■□□□ 1.11
SHC3Q92529 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.97■■□□□ 1.11
SHC3Q92529 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
SHC3Q92529 MIR2861-201ENST00000636310 90 ntBASIC21.97■■□□□ 1.11
SHC3Q92529 AC020907.5-201ENST00000624372 1936 ntBASIC21.97■■□□□ 1.11
SHC3Q92529 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHC3Q92529 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SHC3Q92529 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
SHC3Q92529 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 AC007322.4-201ENST00000509611 723 ntBASIC21.96■■□□□ 1.11
SHC3Q92529 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.96■■□□□ 1.11
SHC3Q92529 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHC3Q92529 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.96■■□□□ 1.11
SHC3Q92529 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHC3Q92529 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.96■■□□□ 1.11
SHC3Q92529 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHC3Q92529 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SHC3Q92529 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC3Q92529 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
SHC3Q92529 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC3Q92529 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.95■■□□□ 1.1
SHC3Q92529 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHC3Q92529 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHC3Q92529 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC3Q92529 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.94■■□□□ 1.1
SHC3Q92529 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.94■■□□□ 1.1
SHC3Q92529 AC016769.1-201ENST00000409132 1010 ntBASIC21.94■■□□□ 1.1
SHC3Q92529 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHC3Q92529 CDV3P1-201ENST00000471403 739 ntBASIC21.94■■□□□ 1.1
SHC3Q92529 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.94■■□□□ 1.1
SHC3Q92529 AC013268.1-206ENST00000638368 961 ntBASIC21.94■■□□□ 1.1
SHC3Q92529 AC112229.1-201ENST00000639295 961 ntBASIC21.94■■□□□ 1.1
SHC3Q92529 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.94■■□□□ 1.1
SHC3Q92529 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.94■■□□□ 1.1
SHC3Q92529 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SHC3Q92529 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.94■■□□□ 1.1
SHC3Q92529 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHC3Q92529 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms