Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 AC104771.1-201ENST00000603335 964 ntBASIC21.59■■□□□ 1.05
RNF139Q8WU17 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RNF139Q8WU17 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF139Q8WU17 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF139Q8WU17 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF139Q8WU17 AL512625.2-201ENST00000417533 625 ntBASIC21.58■■□□□ 1.05
RNF139Q8WU17 TSPY6P-201ENST00000448518 926 ntBASIC21.58■■□□□ 1.05
RNF139Q8WU17 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF139Q8WU17 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RNF139Q8WU17 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF139Q8WU17 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.58■■□□□ 1.04
RNF139Q8WU17 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RNF139Q8WU17 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.58■■□□□ 1.04
RNF139Q8WU17 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF139Q8WU17 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 MKRN4P-201ENST00000444706 1521 ntBASIC21.57■■□□□ 1.04
RNF139Q8WU17 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF139Q8WU17 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.57■■□□□ 1.04
RNF139Q8WU17 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF139Q8WU17 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF139Q8WU17 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
RNF139Q8WU17 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF139Q8WU17 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.56■■□□□ 1.04
RNF139Q8WU17 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF139Q8WU17 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF139Q8WU17 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF139Q8WU17 AC093787.1-201ENST00000450396 207 ntBASIC21.56■■□□□ 1.04
RNF139Q8WU17 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF139Q8WU17 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF139Q8WU17 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF139Q8WU17 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF139Q8WU17 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF139Q8WU17 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF139Q8WU17 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RNF139Q8WU17 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 AL355802.2-201ENST00000402069 882 ntBASIC21.54■■□□□ 1.04
RNF139Q8WU17 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF139Q8WU17 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF139Q8WU17 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF139Q8WU17 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF139Q8WU17 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF139Q8WU17 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF139Q8WU17 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 GUSBP6-202ENST00000438529 1198 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms