Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGCLL1Q8TB92 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGCLL1Q8TB92 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 AC011767.1-201ENST00000617410 1153 ntBASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 AC010536.3-201ENST00000620306 533 ntBASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 AL391422.3-201ENST00000603791 2761 ntBASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 RBM17P2-201ENST00000616397 1405 ntBASIC20.19■□□□□ 0.82
HMGCLL1Q8TB92 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 RARRES2P11-201ENST00000635158 484 ntBASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGCLL1Q8TB92 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 AC245052.3-201ENST00000450182 901 ntBASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGCLL1Q8TB92 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMGCLL1Q8TB92 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms