Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSD4Q8NDX1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSD4Q8NDX1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSD4Q8NDX1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PSD4Q8NDX1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.33■□□□□ 0.68
PSD4Q8NDX1 HLA-L-209ENST00000420110 1011 ntBASIC19.33■□□□□ 0.68
PSD4Q8NDX1 AC007322.1-201ENST00000426983 750 ntBASIC19.33■□□□□ 0.68
PSD4Q8NDX1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 AC010536.3-201ENST00000620306 533 ntBASIC19.33■□□□□ 0.68
PSD4Q8NDX1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 AC026471.6-201ENST00000622954 1905 ntBASIC19.33■□□□□ 0.68
PSD4Q8NDX1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PSD4Q8NDX1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
PSD4Q8NDX1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PSD4Q8NDX1 AC007952.6-201ENST00000573168 2673 ntBASIC19.3■□□□□ 0.68
PSD4Q8NDX1 AC003957.1-201ENST00000625108 2673 ntBASIC19.3■□□□□ 0.68
PSD4Q8NDX1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
PSD4Q8NDX1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSD4Q8NDX1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.29■□□□□ 0.68
PSD4Q8NDX1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSD4Q8NDX1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 KRT16P2-201ENST00000414673 1423 ntBASIC19.28■□□□□ 0.68
PSD4Q8NDX1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.28■□□□□ 0.68
PSD4Q8NDX1 NCF1B-203ENST00000435988 1254 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms