Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 EEF1DP3-203ENST00000566025 782 ntBASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNYL1Q8N7R7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.27■□□□□ 0.83
CCNYL1Q8N7R7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCNYL1Q8N7R7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.27■□□□□ 0.83
CCNYL1Q8N7R7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCNYL1Q8N7R7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 MIR939-201ENST00000401314 82 ntBASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNYL1Q8N7R7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 AC011484.1-201ENST00000377652 1995 ntBASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCNYL1Q8N7R7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 AC112907.3-201ENST00000577781 2400 ntBASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 AC091305.1-201ENST00000479476 895 ntBASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 AC110285.6-201ENST00000617652 491 ntBASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCNYL1Q8N7R7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.23■□□□□ 0.83
CCNYL1Q8N7R7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 AL512408.1-201ENST00000569378 2000 ntBASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNYL1Q8N7R7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms