Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DHX40Q8IX18 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 AP004607.4-201ENST00000530158 1459 ntBASIC22.86■■□□□ 1.25
DHX40Q8IX18 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.86■■□□□ 1.25
DHX40Q8IX18 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.86■■□□□ 1.25
DHX40Q8IX18 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.86■■□□□ 1.25
DHX40Q8IX18 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DHX40Q8IX18 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 AC092720.2-201ENST00000602388 1665 ntBASIC22.85■■□□□ 1.25
DHX40Q8IX18 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 AP001330.3-201ENST00000520123 633 ntBASIC22.85■■□□□ 1.25
DHX40Q8IX18 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DHX40Q8IX18 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.85■■□□□ 1.25
DHX40Q8IX18 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 AC125437.2-201ENST00000625180 2167 ntBASIC22.84■■□□□ 1.25
DHX40Q8IX18 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 AL136967.2-201ENST00000623968 743 ntBASIC22.84■■□□□ 1.25
DHX40Q8IX18 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DHX40Q8IX18 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.84■■□□□ 1.25
DHX40Q8IX18 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
DHX40Q8IX18 TSPY26P-201ENST00000476365 1326 ntBASIC22.83■■□□□ 1.25
DHX40Q8IX18 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.83■■□□□ 1.25
DHX40Q8IX18 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.83■■□□□ 1.25
DHX40Q8IX18 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DHX40Q8IX18 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
DHX40Q8IX18 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
DHX40Q8IX18 MIR939-201ENST00000401314 82 ntBASIC22.83■■□□□ 1.25
DHX40Q8IX18 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.83■■□□□ 1.25
DHX40Q8IX18 AC008764.7-201ENST00000593779 1081 ntBASIC22.83■■□□□ 1.25
DHX40Q8IX18 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
DHX40Q8IX18 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
DHX40Q8IX18 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.83■■□□□ 1.24
DHX40Q8IX18 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
DHX40Q8IX18 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.82■■□□□ 1.24
DHX40Q8IX18 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
DHX40Q8IX18 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.81■■□□□ 1.24
DHX40Q8IX18 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
DHX40Q8IX18 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms