Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.74■□□□□ 0.43
COLCA1Q6ZS62 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 BID-214ENST00000617586 542 ntTSL 5 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.73■□□□□ 0.43
COLCA1Q6ZS62 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 AL157384.1-201ENST00000445995 2473 ntBASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 GABARAPL3-202ENST00000624044 1851 ntBASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
COLCA1Q6ZS62 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 AC073314.1-201ENST00000568729 2216 ntBASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 AL121603.2-201ENST00000557373 2117 ntBASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 LINC01521-201ENST00000504184 1943 ntBASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 AC092437.1-201ENST00000624794 1048 ntBASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COLCA1Q6ZS62 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
COLCA1Q6ZS62 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms