Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPRIN2Q6IMN6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPRIN2Q6IMN6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPRIN2Q6IMN6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPRIN2Q6IMN6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CAPRIN2Q6IMN6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPRIN2Q6IMN6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPRIN2Q6IMN6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 AC010542.4-201ENST00000563151 1910 ntBASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CAPRIN2Q6IMN6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.7■□□□□ 0.91
CAPRIN2Q6IMN6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 AC138907.5-202ENST00000569484 235 ntBASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPRIN2Q6IMN6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 LINC01006-201ENST00000333319 2292 ntBASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPRIN2Q6IMN6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms