Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC091799.1-201ENST00000422823 811 ntBASIC18.07■□□□□ 0.48
LRRK2Q5S007 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 AC137767.1-201ENST00000602918 1920 ntBASIC18.07■□□□□ 0.48
LRRK2Q5S007 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.06■□□□□ 0.48
LRRK2Q5S007 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.06■□□□□ 0.48
LRRK2Q5S007 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRK2Q5S007 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 AC006011.2-201ENST00000621313 1158 ntBASIC18.05■□□□□ 0.48
LRRK2Q5S007 AP000550.4-202ENST00000639755 178 ntBASIC18.05■□□□□ 0.48
LRRK2Q5S007 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 AK4P3-201ENST00000418260 669 ntBASIC18.05■□□□□ 0.48
LRRK2Q5S007 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRK2Q5S007 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRK2Q5S007 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRK2Q5S007 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 BX664615.1-201ENST00000443558 458 ntBASIC18.04■□□□□ 0.48
LRRK2Q5S007 AC104076.2-201ENST00000448912 469 ntBASIC18.04■□□□□ 0.48
LRRK2Q5S007 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LRRK2Q5S007 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRK2Q5S007 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 AC003102.1-202ENST00000563394 1796 ntBASIC18.04■□□□□ 0.48
LRRK2Q5S007 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.04■□□□□ 0.48
LRRK2Q5S007 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRK2Q5S007 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRK2Q5S007 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRK2Q5S007 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRK2Q5S007 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRK2Q5S007 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRK2Q5S007 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 UNC93B2-201ENST00000285383 730 ntBASIC18.02■□□□□ 0.48
LRRK2Q5S007 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms