Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 MFSD11-216ENST00000590393 1141 ntBASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 AC011767.1-201ENST00000617410 1153 ntBASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
KHDC1Q4VXA5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 KRT18P20-201ENST00000548986 1279 ntBASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 AC008175.2-201ENST00000612840 297 ntBASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 MYCNOS-205ENST00000641950 531 ntBASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KHDC1Q4VXA5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KHDC1Q4VXA5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.77■□□□□ 0.91
KHDC1Q4VXA5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
KHDC1Q4VXA5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.76■□□□□ 0.91
KHDC1Q4VXA5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 POU5F1P4-201ENST00000413175 1085 ntBASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KHDC1Q4VXA5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
KHDC1Q4VXA5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms