Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 PDR8YLR266C 2106 nt2.12□□□□□ -2.07
CLP1Q08685 IPT1YDR072C 1584 nt2.12□□□□□ -2.07
CLP1Q08685 YDR381C-AYDR381C-A 345 nt2.12□□□□□ -2.07
CLP1Q08685 VAB2YEL005C 849 nt2.12□□□□□ -2.07
CLP1Q08685 YER172C-AYER172C-A 381 nt2.12□□□□□ -2.07
CLP1Q08685 MPO1YGL010W 525 nt2.12□□□□□ -2.07
CLP1Q08685 YJL032WYJL032W 315 nt2.12□□□□□ -2.07
CLP1Q08685 RPA34YJL148W 702 nt2.12□□□□□ -2.07
CLP1Q08685 YKL115CYKL115C 393 nt2.12□□□□□ -2.07
CLP1Q08685 RCN1YKL159C 636 nt2.12□□□□□ -2.07
CLP1Q08685 RPL6BYLR448W 531 nt2.12□□□□□ -2.07
CLP1Q08685 NBP1YLR457C 960 nt2.12□□□□□ -2.07
CLP1Q08685 GCY1YOR120W 939 nt2.12□□□□□ -2.07
CLP1Q08685 STD1YOR047C 1335 nt2.12□□□□□ -2.07
CLP1Q08685 RTT101YJL047C 2529 nt2.12□□□□□ -2.07
CLP1Q08685 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
CLP1Q08685 UBP2YOR124C 3819 nt2.11□□□□□ -2.07
CLP1Q08685 YMR31YFR049W 372 nt2.11□□□□□ -2.07
CLP1Q08685 CAP1YKL007W 807 nt2.11□□□□□ -2.07
CLP1Q08685 YNL303WYNL303W 348 nt2.11□□□□□ -2.07
CLP1Q08685 TAZ1YPR140W 1146 nt2.11□□□□□ -2.07
CLP1Q08685 HOP1YIL072W 1818 nt2.11□□□□□ -2.07
CLP1Q08685 APM3YBR288C 1452 nt2.11□□□□□ -2.07
CLP1Q08685 NOP14YDL148C 2433 nt2.11□□□□□ -2.07
CLP1Q08685 SSP1YHR184W 1716 nt2.11□□□□□ -2.07
CLP1Q08685 MDM36YPR083W 1740 nt2.11□□□□□ -2.07
CLP1Q08685 PUF4YGL014W 2667 nt2.1□□□□□ -2.07
CLP1Q08685 YCR081C-AYCR081C-A 237 nt2.1□□□□□ -2.07
CLP1Q08685 BRE1YDL074C 2103 nt2.1□□□□□ -2.07
CLP1Q08685 RPS17BYDR447C 411 nt2.1□□□□□ -2.07
CLP1Q08685 COX13YGL191W 390 nt2.1□□□□□ -2.07
CLP1Q08685 AIM19YIL087C 474 nt2.1□□□□□ -2.07
CLP1Q08685 YIL141WYIL141W 390 nt2.1□□□□□ -2.07
CLP1Q08685 YPT52YKR014C 705 nt2.1□□□□□ -2.07
CLP1Q08685 RGM1YMR182C 636 nt2.1□□□□□ -2.07
CLP1Q08685 REV1YOR346W 2958 nt2.1□□□□□ -2.07
CLP1Q08685 YPL142CYPL142C 318 nt2.1□□□□□ -2.07
CLP1Q08685 YBR063CYBR063C 1215 nt2.1□□□□□ -2.07
CLP1Q08685 snR189snR189 189 nt2.1□□□□□ -2.07
CLP1Q08685 RPC40YPR110C 1008 nt2.1□□□□□ -2.07
CLP1Q08685 POP7YBR167C 423 nt2.1□□□□□ -2.07
CLP1Q08685 MUB1YMR100W 1863 nt2.09□□□□□ -2.07
CLP1Q08685 MGA2YIR033W 3342 nt2.09□□□□□ -2.07
CLP1Q08685 RAD18YCR066W 1464 nt2.09□□□□□ -2.07
CLP1Q08685 RTT107YHR154W 3213 nt2.09□□□□□ -2.07
CLP1Q08685 CDC37YDR168W 1521 nt2.09□□□□□ -2.07
CLP1Q08685 FUS1YCL027W 1539 nt2.09□□□□□ -2.07
CLP1Q08685 SLD5YDR489W 885 nt2.09□□□□□ -2.07
CLP1Q08685 PGD1YGL025C 1194 nt2.09□□□□□ -2.07
CLP1Q08685 ACB1YGR037C 264 nt2.09□□□□□ -2.07
CLP1Q08685 PCL5YHR071W 690 nt2.09□□□□□ -2.07
CLP1Q08685 LIN1YHR156C 1023 nt2.09□□□□□ -2.07
CLP1Q08685 TPK3YKL166C 1197 nt2.09□□□□□ -2.07
CLP1Q08685 YKE2YLR200W 345 nt2.09□□□□□ -2.07
CLP1Q08685 ARL3YPL051W 597 nt2.09□□□□□ -2.07
CLP1Q08685 RXT2YBR095C 1293 nt2.09□□□□□ -2.07
CLP1Q08685 SYO1YDL063C 1863 nt2.09□□□□□ -2.08
CLP1Q08685 ESC2YDR363W 1371 nt2.09□□□□□ -2.08
CLP1Q08685 ARK1YNL020C 1917 nt2.09□□□□□ -2.08
CLP1Q08685 PEP1YBL017C 4740 nt2.09□□□□□ -2.08
CLP1Q08685 NUR1YDL089W 1455 nt2.08□□□□□ -2.08
CLP1Q08685 NSE4YDL105W 1209 nt2.08□□□□□ -2.08
CLP1Q08685 RAV2YDR202C 1056 nt2.08□□□□□ -2.08
CLP1Q08685 YDR248CYDR248C 582 nt2.08□□□□□ -2.08
CLP1Q08685 YDR537CYDR537C 606 nt2.08□□□□□ -2.08
CLP1Q08685 YER046W-AYER046W-A 330 nt2.08□□□□□ -2.08
CLP1Q08685 LOC1YFR001W 615 nt2.08□□□□□ -2.08
CLP1Q08685 YGL109WYGL109W 324 nt2.08□□□□□ -2.08
CLP1Q08685 Q0144Q0144 330 nt2.08□□□□□ -2.08
CLP1Q08685 YHL044WYHL044W 708 nt2.08□□□□□ -2.08
CLP1Q08685 YHR212CYHR212C 336 nt2.08□□□□□ -2.08
CLP1Q08685 YIL046W-AYIL046W-A 165 nt2.08□□□□□ -2.08
CLP1Q08685 YJL147CYJL147C 1149 nt2.08□□□□□ -2.08
CLP1Q08685 YAR060CYAR060C 336 nt2.08□□□□□ -2.08
CLP1Q08685 BRX1YOL077C 876 nt2.08□□□□□ -2.08
CLP1Q08685 RRP15YPR143W 753 nt2.08□□□□□ -2.08
CLP1Q08685 FKS1YLR342W 5631 nt2.07□□□□□ -2.08
CLP1Q08685 RRP12YPL012W 3687 nt2.07□□□□□ -2.08
CLP1Q08685 YDR042CYDR042C 603 nt2.07□□□□□ -2.08
CLP1Q08685 SLU7YDR088C 1149 nt2.07□□□□□ -2.08
CLP1Q08685 EMI1YDR512C 564 nt2.07□□□□□ -2.08
CLP1Q08685 RTS3YGR161C 792 nt2.07□□□□□ -2.08
CLP1Q08685 NGL1YOL042W 1092 nt2.07□□□□□ -2.08
CLP1Q08685 GIP3YPL137C 3831 nt2.07□□□□□ -2.08
CLP1Q08685 YKL075CYKL075C 1353 nt2.07□□□□□ -2.08
CLP1Q08685 YLL044WYLL044W 447 nt2.06□□□□□ -2.08
CLP1Q08685 RLP24YLR009W 600 nt2.06□□□□□ -2.08
CLP1Q08685 NYV1YLR093C 762 nt2.06□□□□□ -2.08
CLP1Q08685 GRE2YOL151W 1029 nt2.06□□□□□ -2.08
CLP1Q08685 YOR152CYOR152C 771 nt2.06□□□□□ -2.08
CLP1Q08685 YCL007CYCL007C 393 nt2.06□□□□□ -2.08
CLP1Q08685 UBR1YGR184C 5853 nt2.06□□□□□ -2.08
CLP1Q08685 RLF2YPR018W 1821 nt2.05□□□□□ -2.08
CLP1Q08685 UBC5YDR059C 447 nt2.05□□□□□ -2.08
CLP1Q08685 DAD4YDR320C-A 219 nt2.05□□□□□ -2.08
CLP1Q08685 YFR009W-AYFR009W-A 258 nt2.05□□□□□ -2.08
CLP1Q08685 YGL039WYGL039W 1047 nt2.05□□□□□ -2.08
CLP1Q08685 DSE2YHR143W 978 nt2.05□□□□□ -2.08
CLP1Q08685 VPS8YAL002W 3825 nt2.05□□□□□ -2.08
CLP1Q08685 YJL133C-AYJL133C-A 225 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 52.5 ms