Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.132e-6■■□□□ 13.8
EWSR1Q01844 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.07□□□□□ -0.482e-6■■□□□ 13.8
EWSR1Q01844 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC10.53□□□□□ -0.721e-7■■□□□ 13.8
EWSR1Q01844 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.322e-6■■□□□ 13.8
EWSR1Q01844 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.32■□□□□ 0.042e-6■■□□□ 13.8
EWSR1Q01844 BRI3-202ENST00000456357 667 ntTSL 213.07□□□□□ -0.322e-6■■□□□ 13.8
EWSR1Q01844 BRI3-203ENST00000473967 819 ntTSL 511.33□□□□□ -0.62e-6■■□□□ 13.8
EWSR1Q01844 BRI3-206ENST00000491463 567 ntTSL 47.85□□□□□ -1.152e-6■■□□□ 13.8
EWSR1Q01844 PI4KA-215ENST00000485963 2301 ntTSL 220.2■□□□□ 0.821e-6■■□□□ 13.8
EWSR1Q01844 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.41e-6■■□□□ 13.8
EWSR1Q01844 VDAC1-204ENST00000425992 703 ntTSL 317.43■□□□□ 0.381e-6■■□□□ 13.8
EWSR1Q01844 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.221e-6■■□□□ 13.8
EWSR1Q01844 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.78■□□□□ 0.121e-6■■□□□ 13.8
EWSR1Q01844 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.021e-6■■□□□ 13.8
EWSR1Q01844 PI4KA-203ENST00000449120 574 ntTSL 413.01□□□□□ -0.331e-6■■□□□ 13.8
EWSR1Q01844 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-6■■□□□ 13.8
EWSR1Q01844 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.521e-6■■□□□ 13.8
EWSR1Q01844 BRD2-206ENST00000456339 887 ntTSL 411.14□□□□□ -0.631e-6■■□□□ 13.8
EWSR1Q01844 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.81e-6■■□□□ 13.8
EWSR1Q01844 VDAC1-205ENST00000466080 831 ntTSL 35.61□□□□□ -1.511e-6■■□□□ 13.8
EWSR1Q01844 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.545e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.485e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.015e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.25e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-207ENST00000361140 2701 ntTSL 1 (best)13.52□□□□□ -0.255e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.35e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.525e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-217ENST00000443231 932 ntAPPRIS ALT2 TSL 311.78□□□□□ -0.525e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-221ENST00000476093 1037 ntTSL 311.28□□□□□ -0.65e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.615e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-220ENST00000476027 927 ntTSL 310.35□□□□□ -0.755e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.915e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-204ENST00000354691 2498 ntTSL 28.52□□□□□ -1.055e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)7.7□□□□□ -1.185e-8■■□□□ 13.7
EWSR1Q01844 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.245e-8■■□□□ 13.7
EWSR1Q01844 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.09■□□□□ 0.012e-8■■□□□ 13.7
EWSR1Q01844 VEGFA-214ENST00000493786 551 ntTSL 25.84□□□□□ -1.471e-7■■□□□ 13.7
EWSR1Q01844 PTOV1-211ENST00000598632 1073 ntTSL 215.01□□□□□ -0.013e-8■■□□□ 13.7
EWSR1Q01844 SLC4A2-218ENST00000494125 782 ntTSL 217.84■□□□□ 0.458e-7■■□□□ 13.7
EWSR1Q01844 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.178e-7■■□□□ 13.7
EWSR1Q01844 SLC4A2-213ENST00000483786 571 ntTSL 413.43□□□□□ -0.268e-7■■□□□ 13.7
EWSR1Q01844 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.278e-7■■□□□ 13.7
EWSR1Q01844 SLC4A2-216ENST00000490898 702 ntTSL 311.7□□□□□ -0.548e-7■■□□□ 13.7
EWSR1Q01844 AP006621.3-201ENST00000526588 291 ntTSL 215.2■□□□□ 0.022e-6■■□□□ 13.7
EWSR1Q01844 PUM2-207ENST00000429419 547 ntTSL 53.83□□□□□ -1.88e-8■■□□□ 13.7
EWSR1Q01844 HNRNPU-202ENST00000366525 2851 ntTSL 58.6□□□□□ -1.035e-14■■□□□ 13.7
EWSR1Q01844 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.62e-6■■□□□ 13.6
EWSR1Q01844 ELOVL6-205ENST00000506625 610 ntTSL 47.9□□□□□ -1.142e-6■■□□□ 13.6
EWSR1Q01844 ELOVL6-204ENST00000506461 575 ntTSL 46.61□□□□□ -1.352e-6■■□□□ 13.6
EWSR1Q01844 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.562e-6■■□□□ 13.6
EWSR1Q01844 ELOVL6-203ENST00000503885 458 ntTSL 43.87□□□□□ -1.792e-6■■□□□ 13.6
EWSR1Q01844 ELOVL6-208ENST00000514184 607 ntTSL 32.8□□□□□ -1.962e-6■■□□□ 13.6
EWSR1Q01844 TANGO2-225ENST00000490121 125 ntTSL 38.06□□□□□ -1.121e-7■■□□□ 13.6
EWSR1Q01844 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)11.43□□□□□ -0.581e-7■■□□□ 13.6
EWSR1Q01844 VEGFA-221ENST00000520265 336 ntTSL 510.35□□□□□ -0.751e-7■■□□□ 13.6
EWSR1Q01844 NEAT1-202ENST00000501122 22743 ntBASIC4.2□□□□□ -1.742e-15■■□□□ 13.6
EWSR1Q01844 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.52e-6■■□□□ 13.6
EWSR1Q01844 DNM2-210ENST00000587830 868 ntTSL 58.17□□□□□ -1.18e-7■■□□□ 13.6
EWSR1Q01844 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.36■□□□□ 0.052e-7■■□□□ 13.5
EWSR1Q01844 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.043e-6■■□□□ 13.5
EWSR1Q01844 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 13e-6■■□□□ 13.5
EWSR1Q01844 FAM76B-212ENST00000545654 2001 ntTSL 221.11■□□□□ 0.973e-6■■□□□ 13.5
EWSR1Q01844 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)20■□□□□ 0.793e-6■■□□□ 13.5
EWSR1Q01844 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.15■□□□□ 0.663e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-202ENST00000526656 862 ntTSL 317.61■□□□□ 0.413e-6■■□□□ 13.5
EWSR1Q01844 SUMO3-205ENST00000466861 753 ntTSL 217.32■□□□□ 0.365e-9■■□□□ 13.5
EWSR1Q01844 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.23■□□□□ 0.353e-6■■□□□ 13.5
EWSR1Q01844 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.323e-6■■□□□ 13.5
EWSR1Q01844 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.94■□□□□ 0.35e-9■■□□□ 13.5
EWSR1Q01844 FAM76B-207ENST00000538316 585 ntTSL 516.85■□□□□ 0.293e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-203ENST00000527038 629 ntTSL 216.78■□□□□ 0.283e-6■■□□□ 13.5
EWSR1Q01844 SSX2IP-207ENST00000481102 2457 ntTSL 516.76■□□□□ 0.273e-6■■□□□ 13.5
EWSR1Q01844 COPE-208ENST00000598969 1770 ntTSL 516.74■□□□□ 0.273e-6■■□□□ 13.5
EWSR1Q01844 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.265e-9■■□□□ 13.5
EWSR1Q01844 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.243e-6■■□□□ 13.5
EWSR1Q01844 PFKL-203ENST00000460020 890 ntTSL 516.56■□□□□ 0.243e-6■■□□□ 13.5
EWSR1Q01844 MBOAT2-207ENST00000477073 754 ntTSL 316.31■□□□□ 0.23e-6■■□□□ 13.5
EWSR1Q01844 HDGF-205ENST00000469145 844 ntTSL 216.09■□□□□ 0.173e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-201ENST00000526354 568 ntTSL 215.97■□□□□ 0.153e-6■■□□□ 13.5
EWSR1Q01844 PFKL-206ENST00000467315 1947 ntTSL 215.8■□□□□ 0.123e-6■■□□□ 13.5
EWSR1Q01844 TRIP6-206ENST00000476870 1750 ntTSL 215.77■□□□□ 0.113e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.68■□□□□ 0.13e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-214ENST00000534233 711 ntTSL 215.41■□□□□ 0.063e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-215ENST00000543287 2464 ntTSL 215.18■□□□□ 0.023e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-211ENST00000532421 582 ntTSL 214.96□□□□□ -0.013e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-206ENST00000530467 552 ntTSL 414.9□□□□□ -0.023e-6■■□□□ 13.5
EWSR1Q01844 HDGF-209ENST00000495212 744 ntTSL 314.8□□□□□ -0.043e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-213ENST00000533381 694 ntTSL 314.78□□□□□ -0.043e-6■■□□□ 13.5
EWSR1Q01844 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.72□□□□□ -0.053e-6■■□□□ 13.5
EWSR1Q01844 COPE-204ENST00000593827 601 ntTSL 314.59□□□□□ -0.073e-6■■□□□ 13.5
EWSR1Q01844 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.123e-6■■□□□ 13.5
EWSR1Q01844 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)14.27□□□□□ -0.123e-6■■□□□ 13.5
EWSR1Q01844 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.23□□□□□ -0.133e-6■■□□□ 13.5
EWSR1Q01844 ZBTB1-205ENST00000556818 453 ntTSL 413.98□□□□□ -0.173e-6■■□□□ 13.5
EWSR1Q01844 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.71□□□□□ -0.213e-6■■□□□ 13.5
EWSR1Q01844 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.253e-6■■□□□ 13.5
EWSR1Q01844 HYOU1-205ENST00000529174 549 ntTSL 413.46□□□□□ -0.253e-6■■□□□ 13.5
EWSR1Q01844 HDGF-204ENST00000465180 2060 ntTSL 1 (best)13.2□□□□□ -0.33e-6■■□□□ 13.5
EWSR1Q01844 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.19□□□□□ -0.33e-6■■□□□ 13.5
EWSR1Q01844 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.333e-6■■□□□ 13.5
Retrieved 100 of 7,101 protein–RNA pairs in 35.4 ms