Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBA52P62987 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
UBA52P62987 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
UBA52P62987 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBA52P62987 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UBA52P62987 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.64■□□□□ 0.41
UBA52P62987 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.64■□□□□ 0.41
UBA52P62987 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.64■□□□□ 0.41
UBA52P62987 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
UBA52P62987 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.64■□□□□ 0.41
UBA52P62987 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.64■□□□□ 0.41
UBA52P62987 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.64■□□□□ 0.41
UBA52P62987 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.64■□□□□ 0.41
UBA52P62987 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBA52P62987 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.63■□□□□ 0.41
UBA52P62987 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
UBA52P62987 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
UBA52P62987 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
UBA52P62987 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBA52P62987 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.63■□□□□ 0.41
UBA52P62987 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.63■□□□□ 0.41
UBA52P62987 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.63■□□□□ 0.41
UBA52P62987 KRT18P61-201ENST00000585825 1298 ntBASIC17.63■□□□□ 0.41
UBA52P62987 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.63■□□□□ 0.41
UBA52P62987 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.63■□□□□ 0.41
UBA52P62987 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
UBA52P62987 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
UBA52P62987 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.63■□□□□ 0.41
UBA52P62987 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBA52P62987 GABARAPL3-202ENST00000624044 1851 ntBASIC17.63■□□□□ 0.41
UBA52P62987 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
UBA52P62987 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.62■□□□□ 0.41
UBA52P62987 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.62■□□□□ 0.41
UBA52P62987 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBA52P62987 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.62■□□□□ 0.41
UBA52P62987 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 TPRG1LP1-201ENST00000598702 760 ntBASIC17.62■□□□□ 0.41
UBA52P62987 AC073111.5-205ENST00000641717 521 ntBASIC17.62■□□□□ 0.41
UBA52P62987 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBA52P62987 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBA52P62987 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBA52P62987 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
UBA52P62987 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.61■□□□□ 0.41
UBA52P62987 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.61■□□□□ 0.41
UBA52P62987 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.61■□□□□ 0.41
UBA52P62987 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBA52P62987 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UBA52P62987 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBA52P62987 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBA52P62987 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA52P62987 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBA52P62987 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBA52P62987 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms