Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.47■■□□□ 1.83
EIF4A1P60842 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
EIF4A1P60842 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
EIF4A1P60842 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.46■■□□□ 1.83
EIF4A1P60842 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
EIF4A1P60842 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
EIF4A1P60842 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
EIF4A1P60842 AC011484.1-201ENST00000377652 1995 ntBASIC26.46■■□□□ 1.83
EIF4A1P60842 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
EIF4A1P60842 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.46■■□□□ 1.83
EIF4A1P60842 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
EIF4A1P60842 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
EIF4A1P60842 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.46■■□□□ 1.83
EIF4A1P60842 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
EIF4A1P60842 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
EIF4A1P60842 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
EIF4A1P60842 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
EIF4A1P60842 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
EIF4A1P60842 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.45■■□□□ 1.82
EIF4A1P60842 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.45■■□□□ 1.82
EIF4A1P60842 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.45■■□□□ 1.82
EIF4A1P60842 AP003097.1-201ENST00000530657 1135 ntBASIC26.45■■□□□ 1.82
EIF4A1P60842 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.45■■□□□ 1.82
EIF4A1P60842 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.45■■□□□ 1.82
EIF4A1P60842 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
EIF4A1P60842 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
EIF4A1P60842 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.44■■□□□ 1.82
EIF4A1P60842 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
EIF4A1P60842 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 AC098590.1-201ENST00000468126 897 ntBASIC26.44■■□□□ 1.82
EIF4A1P60842 PNMA6B-201ENST00000538162 1200 ntBASIC26.44■■□□□ 1.82
EIF4A1P60842 AC006058.3-201ENST00000606217 1069 ntBASIC26.44■■□□□ 1.82
EIF4A1P60842 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
EIF4A1P60842 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 AC128676.1-201ENST00000454392 318 ntBASIC26.43■■□□□ 1.82
EIF4A1P60842 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.43■■□□□ 1.82
EIF4A1P60842 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.43■■□□□ 1.82
EIF4A1P60842 C2orf69P4-201ENST00000565394 541 ntBASIC26.43■■□□□ 1.82
EIF4A1P60842 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.43■■□□□ 1.82
EIF4A1P60842 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
EIF4A1P60842 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
EIF4A1P60842 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
EIF4A1P60842 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
EIF4A1P60842 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
EIF4A1P60842 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
EIF4A1P60842 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.42■■□□□ 1.82
EIF4A1P60842 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
EIF4A1P60842 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
EIF4A1P60842 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
EIF4A1P60842 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
EIF4A1P60842 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.41■■□□□ 1.82
EIF4A1P60842 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 AL356652.1-201ENST00000615962 565 ntBASIC26.41■■□□□ 1.82
EIF4A1P60842 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
EIF4A1P60842 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 AC092368.3-202ENST00000574180 1591 ntBASIC26.41■■□□□ 1.82
EIF4A1P60842 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
EIF4A1P60842 AL049796.1-201ENST00000565336 1766 ntBASIC26.41■■□□□ 1.82
EIF4A1P60842 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
EIF4A1P60842 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
EIF4A1P60842 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.4■■□□□ 1.82
EIF4A1P60842 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
EIF4A1P60842 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.4■■□□□ 1.82
EIF4A1P60842 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.4■■□□□ 1.82
EIF4A1P60842 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.4■■□□□ 1.82
EIF4A1P60842 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.4■■□□□ 1.82
EIF4A1P60842 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
EIF4A1P60842 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms