Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NR1H2P55055 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NR1H2P55055 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.41■□□□□ 0.7
NR1H2P55055 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.4■□□□□ 0.7
NR1H2P55055 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NR1H2P55055 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.4■□□□□ 0.7
NR1H2P55055 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.4■□□□□ 0.7
NR1H2P55055 LETM1P2-201ENST00000597330 2178 ntBASIC19.4■□□□□ 0.7
NR1H2P55055 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NR1H2P55055 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NR1H2P55055 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NR1H2P55055 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NR1H2P55055 AC026471.6-201ENST00000622954 1905 ntBASIC19.39■□□□□ 0.7
NR1H2P55055 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
NR1H2P55055 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
NR1H2P55055 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
NR1H2P55055 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.39■□□□□ 0.69
NR1H2P55055 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NR1H2P55055 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.39■□□□□ 0.69
NR1H2P55055 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NR1H2P55055 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NR1H2P55055 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.39■□□□□ 0.69
NR1H2P55055 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.38■□□□□ 0.69
NR1H2P55055 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.38■□□□□ 0.69
NR1H2P55055 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.38■□□□□ 0.69
NR1H2P55055 FP325331.1-202ENST00000623531 1380 ntBASIC19.38■□□□□ 0.69
NR1H2P55055 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NR1H2P55055 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H2P55055 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.37■□□□□ 0.69
NR1H2P55055 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
NR1H2P55055 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.37■□□□□ 0.69
NR1H2P55055 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H2P55055 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.37■□□□□ 0.69
NR1H2P55055 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
NR1H2P55055 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NR1H2P55055 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.37■□□□□ 0.69
NR1H2P55055 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NR1H2P55055 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NR1H2P55055 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.36■□□□□ 0.69
NR1H2P55055 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.36■□□□□ 0.69
NR1H2P55055 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NR1H2P55055 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NR1H2P55055 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H2P55055 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.35■□□□□ 0.69
NR1H2P55055 TNXA-203ENST00000507684 2038 ntBASIC19.35■□□□□ 0.69
NR1H2P55055 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms