Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCNKAP51800 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 AF106564.1-201ENST00000607058 2553 ntBASIC20.19■□□□□ 0.82
CLCNKAP51800 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCNKAP51800 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCNKAP51800 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCNKAP51800 CYP2T3P-201ENST00000601990 817 ntBASIC20.19■□□□□ 0.82
CLCNKAP51800 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKAP51800 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCNKAP51800 AL049796.1-201ENST00000565336 1766 ntBASIC20.18■□□□□ 0.82
CLCNKAP51800 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CLCNKAP51800 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCNKAP51800 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLCNKAP51800 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLCNKAP51800 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCNKAP51800 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.18■□□□□ 0.82
CLCNKAP51800 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCNKAP51800 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CLCNKAP51800 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLCNKAP51800 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCNKAP51800 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLCNKAP51800 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLCNKAP51800 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCNKAP51800 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCNKAP51800 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCNKAP51800 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCNKAP51800 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCNKAP51800 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLCNKAP51800 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCNKAP51800 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCNKAP51800 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCNKAP51800 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCNKAP51800 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCNKAP51800 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCNKAP51800 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCNKAP51800 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCNKAP51800 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCNKAP51800 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCNKAP51800 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.15■□□□□ 0.82
CLCNKAP51800 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCNKAP51800 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCNKAP51800 MYC-209ENST00000641252 345 ntBASIC20.15■□□□□ 0.82
CLCNKAP51800 CYP21A1P-202ENST00000354927 1481 ntBASIC20.15■□□□□ 0.82
CLCNKAP51800 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCNKAP51800 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCNKAP51800 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.15■□□□□ 0.82
CLCNKAP51800 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CLCNKAP51800 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCNKAP51800 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.14■□□□□ 0.82
CLCNKAP51800 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLCNKAP51800 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCNKAP51800 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CLCNKAP51800 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.14■□□□□ 0.81
CLCNKAP51800 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCNKAP51800 KRT18P6-201ENST00000555540 1265 ntBASIC20.14■□□□□ 0.81
CLCNKAP51800 AC098934.4-201ENST00000564127 592 ntBASIC20.14■□□□□ 0.81
CLCNKAP51800 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCNKAP51800 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms