Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.08■□□□□ 0.48
CCR9P51686 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.08■□□□□ 0.48
CCR9P51686 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CCR9P51686 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCR9P51686 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.08■□□□□ 0.48
CCR9P51686 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.08■□□□□ 0.48
CCR9P51686 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCR9P51686 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.08■□□□□ 0.48
CCR9P51686 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCR9P51686 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCR9P51686 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.07■□□□□ 0.48
CCR9P51686 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.07■□□□□ 0.48
CCR9P51686 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCR9P51686 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.07■□□□□ 0.48
CCR9P51686 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
CCR9P51686 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.06■□□□□ 0.48
CCR9P51686 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCR9P51686 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCR9P51686 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.06■□□□□ 0.48
CCR9P51686 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.06■□□□□ 0.48
CCR9P51686 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCR9P51686 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCR9P51686 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCR9P51686 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCR9P51686 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.05■□□□□ 0.48
CCR9P51686 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.05■□□□□ 0.48
CCR9P51686 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCR9P51686 EDA-201ENST00000338901 1233 ntBASIC18.05■□□□□ 0.48
CCR9P51686 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCR9P51686 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCR9P51686 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.05■□□□□ 0.48
CCR9P51686 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.05■□□□□ 0.48
CCR9P51686 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CCR9P51686 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.05■□□□□ 0.48
CCR9P51686 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCR9P51686 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 AC061975.6-201ENST00000579045 1553 ntBASIC18.04■□□□□ 0.48
CCR9P51686 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.04■□□□□ 0.48
CCR9P51686 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.04■□□□□ 0.48
CCR9P51686 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCR9P51686 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.04■□□□□ 0.48
CCR9P51686 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.04■□□□□ 0.48
CCR9P51686 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCR9P51686 AL512408.1-201ENST00000569378 2000 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms