Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 TERF1P2-201ENST00000583350 1212 ntBASIC19.9■□□□□ 0.78
KRT6CP48668 RARRES2P11-201ENST00000635158 484 ntBASIC19.9■□□□□ 0.78
KRT6CP48668 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6CP48668 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT6CP48668 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
KRT6CP48668 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT6CP48668 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.89■□□□□ 0.78
KRT6CP48668 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT6CP48668 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT6CP48668 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT6CP48668 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT6CP48668 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT6CP48668 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
KRT6CP48668 AP001160.3-201ENST00000601484 763 ntBASIC19.89■□□□□ 0.77
KRT6CP48668 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRT6CP48668 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
KRT6CP48668 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
KRT6CP48668 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT6CP48668 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT6CP48668 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRT6CP48668 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.88■□□□□ 0.77
KRT6CP48668 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT6CP48668 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT6CP48668 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT6CP48668 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT6CP48668 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT6CP48668 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT6CP48668 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT6CP48668 AC027702.1-201ENST00000563810 1770 ntBASIC19.88■□□□□ 0.77
KRT6CP48668 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KRT6CP48668 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT6CP48668 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.87■□□□□ 0.77
KRT6CP48668 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.87■□□□□ 0.77
KRT6CP48668 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.87■□□□□ 0.77
KRT6CP48668 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KRT6CP48668 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT6CP48668 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT6CP48668 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
KRT6CP48668 AC020907.5-201ENST00000624372 1936 ntBASIC19.86■□□□□ 0.77
KRT6CP48668 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT6CP48668 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT6CP48668 KRT18P20-201ENST00000548986 1279 ntBASIC19.86■□□□□ 0.77
KRT6CP48668 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT6CP48668 CCDC92B-201ENST00000575506 885 ntBASIC19.86■□□□□ 0.77
KRT6CP48668 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT6CP48668 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT6CP48668 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT6CP48668 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT6CP48668 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT6CP48668 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT6CP48668 KRT18P14-201ENST00000534205 1250 ntBASIC19.85■□□□□ 0.77
KRT6CP48668 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT6CP48668 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT6CP48668 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms