Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC6A12P48065 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SLC6A12P48065 MIR2861-201ENST00000636310 90 ntBASIC19.9■□□□□ 0.78
SLC6A12P48065 AC092667.1-201ENST00000434301 2586 ntBASIC19.9■□□□□ 0.78
SLC6A12P48065 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A12P48065 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC6A12P48065 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SLC6A12P48065 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.89■□□□□ 0.78
SLC6A12P48065 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SLC6A12P48065 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SLC6A12P48065 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC6A12P48065 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC6A12P48065 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
SLC6A12P48065 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC6A12P48065 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SLC6A12P48065 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC6A12P48065 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC6A12P48065 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SLC6A12P48065 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC6A12P48065 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 AC020907.5-201ENST00000624372 1936 ntBASIC19.88■□□□□ 0.77
SLC6A12P48065 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A12P48065 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SLC6A12P48065 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 AC007322.4-201ENST00000509611 723 ntBASIC19.88■□□□□ 0.77
SLC6A12P48065 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.88■□□□□ 0.77
SLC6A12P48065 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.88■□□□□ 0.77
SLC6A12P48065 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC6A12P48065 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A12P48065 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC6A12P48065 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC6A12P48065 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
SLC6A12P48065 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC6A12P48065 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SLC6A12P48065 CDV3P1-201ENST00000471403 739 ntBASIC19.87■□□□□ 0.77
SLC6A12P48065 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC6A12P48065 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC6A12P48065 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC6A12P48065 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC6A12P48065 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC6A12P48065 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC6A12P48065 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SLC6A12P48065 AC016769.1-201ENST00000409132 1010 ntBASIC19.86■□□□□ 0.77
SLC6A12P48065 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC6A12P48065 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC6A12P48065 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
SLC6A12P48065 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC6A12P48065 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SLC6A12P48065 AC013268.1-206ENST00000638368 961 ntBASIC19.86■□□□□ 0.77
SLC6A12P48065 AC112229.1-201ENST00000639295 961 ntBASIC19.86■□□□□ 0.77
SLC6A12P48065 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A12P48065 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC6A12P48065 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC6A12P48065 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC6A12P48065 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SLC6A12P48065 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC6A12P48065 AL591742.1-201ENST00000604433 565 ntBASIC19.85■□□□□ 0.77
SLC6A12P48065 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A12P48065 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms