Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PIK3CBP42338 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3CBP42338 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PIK3CBP42338 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3CBP42338 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PIK3CBP42338 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3CBP42338 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3CBP42338 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.74■□□□□ 0.75
PIK3CBP42338 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PIK3CBP42338 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PIK3CBP42338 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
PIK3CBP42338 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
PIK3CBP42338 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PIK3CBP42338 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PIK3CBP42338 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
PIK3CBP42338 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PIK3CBP42338 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3CBP42338 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.73■□□□□ 0.75
PIK3CBP42338 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.72■□□□□ 0.75
PIK3CBP42338 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PIK3CBP42338 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PIK3CBP42338 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.72■□□□□ 0.75
PIK3CBP42338 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.72■□□□□ 0.75
PIK3CBP42338 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PIK3CBP42338 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.72■□□□□ 0.75
PIK3CBP42338 AC137761.2-201ENST00000561729 223 ntBASIC19.72■□□□□ 0.75
PIK3CBP42338 AC145350.3-201ENST00000569033 163 ntBASIC19.72■□□□□ 0.75
PIK3CBP42338 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.72■□□□□ 0.75
PIK3CBP42338 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3CBP42338 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PIK3CBP42338 AC027702.1-201ENST00000563810 1770 ntBASIC19.71■□□□□ 0.75
PIK3CBP42338 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.71■□□□□ 0.75
PIK3CBP42338 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PIK3CBP42338 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 FEM1AP1-201ENST00000431297 1995 ntBASIC19.71■□□□□ 0.75
PIK3CBP42338 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.71■□□□□ 0.75
PIK3CBP42338 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3CBP42338 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
PIK3CBP42338 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3CBP42338 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3CBP42338 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.7■□□□□ 0.74
PIK3CBP42338 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3CBP42338 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.7■□□□□ 0.74
PIK3CBP42338 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.7■□□□□ 0.74
PIK3CBP42338 AC010536.3-201ENST00000620306 533 ntBASIC19.7■□□□□ 0.74
PIK3CBP42338 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3CBP42338 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3CBP42338 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PIK3CBP42338 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PIK3CBP42338 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PIK3CBP42338 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PIK3CBP42338 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 AC007322.3-201ENST00000426526 701 ntBASIC19.69■□□□□ 0.74
PIK3CBP42338 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3CBP42338 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.69■□□□□ 0.74
PIK3CBP42338 TERF1P5-201ENST00000477545 1207 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms