Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RPL13AP40429 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.2□□□□□ -0.14
RPL13AP40429 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.2□□□□□ -0.14
RPL13AP40429 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL13AP40429 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 LINC01960-201ENST00000563759 1884 ntBASIC14.19□□□□□ -0.14
RPL13AP40429 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL13AP40429 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.19□□□□□ -0.14
RPL13AP40429 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPL13AP40429 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL13AP40429 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RPL13AP40429 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL13AP40429 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RPL13AP40429 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL13AP40429 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL13AP40429 BX323043.1-201ENST00000641006 1765 ntBASIC14.18□□□□□ -0.14
RPL13AP40429 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RPL13AP40429 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPL13AP40429 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL13AP40429 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL13AP40429 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL13AP40429 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.17□□□□□ -0.14
RPL13AP40429 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 KRT8P33-201ENST00000508125 1423 ntBASIC14.17□□□□□ -0.14
RPL13AP40429 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RPL13AP40429 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL13AP40429 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.17□□□□□ -0.14
RPL13AP40429 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.17□□□□□ -0.14
RPL13AP40429 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL13AP40429 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPL13AP40429 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL13AP40429 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL13AP40429 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPL13AP40429 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL13AP40429 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RPL13AP40429 LONRF2P2-201ENST00000439212 571 ntBASIC14.16□□□□□ -0.14
RPL13AP40429 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RPL13AP40429 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL13AP40429 AFG3L1P-217ENST00000557444 2447 ntBASIC14.16□□□□□ -0.14
RPL13AP40429 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 PCDHAC2-203ENST00000615316 3011 ntBASIC14.16□□□□□ -0.14
RPL13AP40429 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL13AP40429 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL13AP40429 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms