Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.47■□□□□ 0.71
KRT20P35900 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.47■□□□□ 0.71
KRT20P35900 AC104187.1-201ENST00000607510 612 ntBASIC19.47■□□□□ 0.71
KRT20P35900 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.47■□□□□ 0.71
KRT20P35900 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KRT20P35900 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
KRT20P35900 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 AC007952.6-201ENST00000573168 2673 ntBASIC19.47■□□□□ 0.71
KRT20P35900 AC003957.1-201ENST00000625108 2673 ntBASIC19.47■□□□□ 0.71
KRT20P35900 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRT20P35900 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT20P35900 AC004854.2-201ENST00000608450 1441 ntBASIC19.46■□□□□ 0.71
KRT20P35900 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT20P35900 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
KRT20P35900 AC120498.10-201ENST00000621827 505 ntBASIC19.46■□□□□ 0.71
KRT20P35900 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT20P35900 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
KRT20P35900 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT20P35900 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT20P35900 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
KRT20P35900 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
KRT20P35900 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
KRT20P35900 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
KRT20P35900 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.45■□□□□ 0.7
KRT20P35900 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.45■□□□□ 0.7
KRT20P35900 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
KRT20P35900 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT20P35900 AP004607.4-201ENST00000530158 1459 ntBASIC19.45■□□□□ 0.7
KRT20P35900 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT20P35900 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KRT20P35900 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
KRT20P35900 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT20P35900 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 POU5F1P4-201ENST00000413175 1085 ntBASIC19.44■□□□□ 0.7
KRT20P35900 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT20P35900 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT20P35900 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT20P35900 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT20P35900 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT20P35900 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
KRT20P35900 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT20P35900 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT20P35900 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT20P35900 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT20P35900 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT20P35900 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT20P35900 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KRT20P35900 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms