Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.847e-7■■■■□ 25.3
RPS3P23396 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.597e-7■■■■□ 25.3
RPS3P23396 MORF4L1-204ENST00000557961 591 ntTSL 223.03■■□□□ 1.287e-7■■■■□ 25.3
RPS3P23396 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.33■■□□□ 1.017e-7■■■■□ 25.3
RPS3P23396 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.713e-8■■■■□ 25.3
RPS3P23396 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.673e-9■■■■□ 25.3
RPS3P23396 PPA2-215ENST00000508518 677 ntTSL 519.2■□□□□ 0.667e-7■■■■□ 25.3
RPS3P23396 C6orf136-204ENST00000446773 1496 ntTSL 1 (best)19.1■□□□□ 0.657e-7■■■■□ 25.3
RPS3P23396 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.647e-7■■■■□ 25.3
RPS3P23396 PPOX-212ENST00000495483 2471 ntTSL 219.07■□□□□ 0.647e-7■■■■□ 25.3
RPS3P23396 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.67e-7■■■■□ 25.3
RPS3P23396 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.577e-7■■■■□ 25.3
RPS3P23396 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.549e-10■■■■□ 25.3
RPS3P23396 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.537e-7■■■■□ 25.3
RPS3P23396 RHOC-210ENST00000425265 866 ntTSL 318.2■□□□□ 0.57e-7■■■■□ 25.3
RPS3P23396 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.57e-7■■■■□ 25.3
RPS3P23396 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.05■□□□□ 0.487e-7■■■■□ 25.3
RPS3P23396 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.477e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-205ENST00000519588 578 ntTSL 417.99■□□□□ 0.477e-7■■■■□ 25.3
RPS3P23396 CDC6-203ENST00000577249 541 ntTSL 417.95■□□□□ 0.462e-6■■■■□ 25.3
RPS3P23396 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.85■□□□□ 0.457e-7■■■■□ 25.3
RPS3P23396 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.84■□□□□ 0.457e-7■■■■□ 25.3
RPS3P23396 PPA2-217ENST00000509426 1356 ntTSL 217.66■□□□□ 0.427e-7■■■■□ 25.3
RPS3P23396 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.54■□□□□ 0.47e-7■■■■□ 25.3
RPS3P23396 PPA2-216ENST00000509031 1177 ntTSL 1 (best)17.27■□□□□ 0.367e-7■■■■□ 25.3
RPS3P23396 PPA2-218ENST00000510015 582 ntTSL 517.22■□□□□ 0.357e-7■■■■□ 25.3
RPS3P23396 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.337e-7■■■■□ 25.3
RPS3P23396 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.329e-10■■■■□ 25.3
RPS3P23396 MORF4L1-220ENST00000559930 678 ntTSL 416.9■□□□□ 0.37e-7■■■■□ 25.3
RPS3P23396 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.88■□□□□ 0.297e-7■■■■□ 25.3
RPS3P23396 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.297e-7■■■■□ 25.3
RPS3P23396 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.7■□□□□ 0.267e-7■■■■□ 25.3
RPS3P23396 EXOSC3-203ENST00000465229 1625 ntTSL 216.66■□□□□ 0.269e-10■■■■□ 25.3
RPS3P23396 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.65■□□□□ 0.269e-10■■■■□ 25.3
RPS3P23396 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.257e-7■■■■□ 25.3
RPS3P23396 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.247e-7■■■■□ 25.3
RPS3P23396 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.233e-9■■■■□ 25.3
RPS3P23396 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.177e-7■■■■□ 25.3
RPS3P23396 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.94■□□□□ 0.147e-7■■■■□ 25.3
RPS3P23396 PPOX-213ENST00000497522 816 ntTSL 415.64■□□□□ 0.097e-7■■■■□ 25.3
RPS3P23396 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.077e-7■■■■□ 25.3
RPS3P23396 ECH1-217ENST00000602115 209 ntTSL 315.4■□□□□ 0.067e-7■■■■□ 25.3
RPS3P23396 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.38■□□□□ 0.057e-7■■■■□ 25.3
RPS3P23396 RHOC-218ENST00000528831 463 ntTSL 315.36■□□□□ 0.057e-7■■■■□ 25.3
RPS3P23396 C6orf136-212ENST00000488383 1337 ntTSL 515.32■□□□□ 0.047e-7■■■■□ 25.3
RPS3P23396 RPUSD3-215ENST00000475470 2413 ntTSL 215.23■□□□□ 0.037e-7■■■■□ 25.3
RPS3P23396 METTL5-209ENST00000471560 550 ntTSL 215.21■□□□□ 0.037e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-218ENST00000524164 1734 ntTSL 515.19■□□□□ 0.027e-7■■■■□ 25.3
RPS3P23396 CDC6-204ENST00000580824 696 ntTSL 315.14■□□□□ 0.012e-6■■■■□ 25.3
RPS3P23396 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.017e-7■■■■□ 25.3
RPS3P23396 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.017e-7■■■■□ 25.3
RPS3P23396 RHOC-212ENST00000468093 1042 ntTSL 314.92□□□□□ -0.027e-7■■■■□ 25.3
RPS3P23396 DCTN4-204ENST00000517421 576 ntTSL 514.91□□□□□ -0.027e-7■■■■□ 25.3
RPS3P23396 EXOSC3-205ENST00000482614 462 ntTSL 514.86□□□□□ -0.039e-10■■■■□ 25.3
RPS3P23396 AL603832.3-205ENST00000606954 680 ntTSL 214.7□□□□□ -0.067e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-219ENST00000524234 735 ntTSL 314.59□□□□□ -0.077e-7■■■■□ 25.3
RPS3P23396 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.117e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.137e-7■■■■□ 25.3
RPS3P23396 RHOC-219ENST00000534717 574 ntTSL 314.12□□□□□ -0.157e-7■■■■□ 25.3
RPS3P23396 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.08□□□□□ -0.157e-7■■■■□ 25.3
RPS3P23396 RHOC-213ENST00000473074 943 ntTSL 513.88□□□□□ -0.197e-7■■■■□ 25.3
RPS3P23396 PPA2-203ENST00000351450 1072 ntTSL 213.85□□□□□ -0.197e-7■■■■□ 25.3
RPS3P23396 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.214e-7■■■■□ 25.3
RPS3P23396 DCTN4-207ENST00000519313 647 ntTSL 513.68□□□□□ -0.227e-7■■■■□ 25.3
RPS3P23396 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.67□□□□□ -0.227e-7■■■■□ 25.3
RPS3P23396 ELP4-204ENST00000474374 1161 ntTSL 513.65□□□□□ -0.227e-7■■■■□ 25.3
RPS3P23396 ERAL1-202ENST00000412138 1039 ntTSL 513.56□□□□□ -0.244e-7■■■■□ 25.3
RPS3P23396 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.257e-7■■■■□ 25.3
RPS3P23396 ERAL1-207ENST00000580917 850 ntTSL 313.44□□□□□ -0.264e-7■■■■□ 25.3
RPS3P23396 RHOC-209ENST00000414971 470 ntTSL 313.43□□□□□ -0.267e-7■■■■□ 25.3
RPS3P23396 GABARAP-202ENST00000570856 583 ntTSL 213.42□□□□□ -0.267e-7■■■■□ 25.3
RPS3P23396 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.277e-7■■■■□ 25.3
RPS3P23396 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.34□□□□□ -0.277e-7■■■■□ 25.3
RPS3P23396 RHOC-215ENST00000484054 521 ntTSL 513.31□□□□□ -0.287e-7■■■■□ 25.3
RPS3P23396 ERAL1-206ENST00000578001 579 ntTSL 313.25□□□□□ -0.294e-7■■■■□ 25.3
RPS3P23396 NTPCR-204ENST00000487953 527 ntTSL 313.21□□□□□ -0.297e-7■■■■□ 25.3
RPS3P23396 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.19□□□□□ -0.37e-7■■■■□ 25.3
RPS3P23396 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.37e-7■■■■□ 25.3
RPS3P23396 SYNJ2BP-COX16-204ENST00000618385 656 ntTSL 313.17□□□□□ -0.37e-7■■■■□ 25.3
RPS3P23396 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.94□□□□□ -0.347e-7■■■■□ 25.3
RPS3P23396 C6orf136-208ENST00000467801 583 ntTSL 212.91□□□□□ -0.347e-7■■■■□ 25.3
RPS3P23396 CTSL-204ENST00000375894 975 ntTSL 312.85□□□□□ -0.357e-7■■■■□ 25.3
RPS3P23396 MAT2A-205ENST00000481412 1438 ntTSL 1 (best)12.85□□□□□ -0.357e-7■■■■□ 25.3
RPS3P23396 ERAL1-203ENST00000461894 1628 ntTSL 1 (best)12.77□□□□□ -0.364e-7■■■■□ 25.3
RPS3P23396 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC12.74□□□□□ -0.377e-7■■■■□ 25.3
RPS3P23396 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC12.72□□□□□ -0.377e-7■■■■□ 25.3
RPS3P23396 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.52□□□□□ -0.417e-7■■■■□ 25.3
RPS3P23396 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC12.51□□□□□ -0.417e-7■■■■□ 25.3
RPS3P23396 RPUSD3-203ENST00000423108 756 ntTSL 212.48□□□□□ -0.417e-7■■■■□ 25.3
RPS3P23396 ELP4-214ENST00000638917 2306 ntTSL 512.45□□□□□ -0.427e-7■■■■□ 25.3
RPS3P23396 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.427e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-209ENST00000521335 1672 ntTSL 212.26□□□□□ -0.457e-7■■■■□ 25.3
RPS3P23396 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC12.19□□□□□ -0.467e-7■■■■□ 25.3
RPS3P23396 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.472e-6■■■■□ 25.3
RPS3P23396 RHOC-216ENST00000484280 891 ntTSL 512.11□□□□□ -0.477e-7■■■■□ 25.3
RPS3P23396 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.07□□□□□ -0.487e-7■■■■□ 25.3
RPS3P23396 ELP4-221ENST00000640081 2385 ntTSL 512.05□□□□□ -0.487e-7■■■■□ 25.3
RPS3P23396 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.487e-7■■■■□ 25.3
RPS3P23396 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC11.99□□□□□ -0.497e-7■■■■□ 25.3
RPS3P23396 ELP4-211ENST00000638508 2163 ntTSL 511.97□□□□□ -0.497e-7■■■■□ 25.3
Retrieved 100 of 24,271 protein–RNA pairs in 137.7 ms