Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC099778.1-201ENST00000568593 1911 ntBASIC19.1■□□□□ 0.65
TNFRSF1BP20333 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF1BP20333 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 AC007952.6-201ENST00000573168 2673 ntBASIC19.09■□□□□ 0.65
TNFRSF1BP20333 AC003957.1-201ENST00000625108 2673 ntBASIC19.09■□□□□ 0.65
TNFRSF1BP20333 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 AC091305.1-201ENST00000479476 895 ntBASIC19.09■□□□□ 0.65
TNFRSF1BP20333 AC012414.1-201ENST00000556676 535 ntBASIC19.09■□□□□ 0.65
TNFRSF1BP20333 TPRG1LP1-201ENST00000598702 760 ntBASIC19.09■□□□□ 0.65
TNFRSF1BP20333 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TNFRSF1BP20333 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TNFRSF1BP20333 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 MIR6084-201ENST00000622012 110 ntBASIC19.08■□□□□ 0.64
TNFRSF1BP20333 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TNFRSF1BP20333 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.07■□□□□ 0.64
TNFRSF1BP20333 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF1BP20333 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF1BP20333 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF1BP20333 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF1BP20333 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms