Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.48■■□□□ 1.03
TCF4P15884 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.48■■□□□ 1.03
TCF4P15884 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.48■■□□□ 1.03
TCF4P15884 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCF4P15884 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
TCF4P15884 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCF4P15884 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCF4P15884 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.48■■□□□ 1.03
TCF4P15884 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.48■■□□□ 1.03
TCF4P15884 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.48■■□□□ 1.03
TCF4P15884 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.47■■□□□ 1.03
TCF4P15884 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.47■■□□□ 1.03
TCF4P15884 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.47■■□□□ 1.03
TCF4P15884 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TCF4P15884 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.47■■□□□ 1.03
TCF4P15884 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.47■■□□□ 1.03
TCF4P15884 SLC7A5P1-201ENST00000568957 537 ntBASIC21.47■■□□□ 1.03
TCF4P15884 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TCF4P15884 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCF4P15884 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.47■■□□□ 1.03
TCF4P15884 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.46■■□□□ 1.03
TCF4P15884 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.46■■□□□ 1.03
TCF4P15884 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.46■■□□□ 1.03
TCF4P15884 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.46■■□□□ 1.03
TCF4P15884 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.46■■□□□ 1.03
TCF4P15884 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.46■■□□□ 1.03
TCF4P15884 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.46■■□□□ 1.03
TCF4P15884 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.46■■□□□ 1.03
TCF4P15884 MYCNOS-205ENST00000641950 531 ntBASIC21.46■■□□□ 1.03
TCF4P15884 AC020907.5-201ENST00000624372 1936 ntBASIC21.46■■□□□ 1.03
TCF4P15884 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.46■■□□□ 1.03
TCF4P15884 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCF4P15884 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.45■■□□□ 1.03
TCF4P15884 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.45■■□□□ 1.03
TCF4P15884 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.45■■□□□ 1.02
TCF4P15884 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.45■■□□□ 1.02
TCF4P15884 AC243732.1-201ENST00000612648 864 ntBASIC21.45■■□□□ 1.02
TCF4P15884 AC116050.2-201ENST00000612102 1779 ntBASIC21.45■■□□□ 1.02
TCF4P15884 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.45■■□□□ 1.02
TCF4P15884 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.45■■□□□ 1.02
TCF4P15884 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TCF4P15884 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.45■■□□□ 1.02
TCF4P15884 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TCF4P15884 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
TCF4P15884 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TCF4P15884 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCF4P15884 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
TCF4P15884 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TCF4P15884 PCDHAC2-203ENST00000615316 3011 ntBASIC21.43■■□□□ 1.02
TCF4P15884 AL512408.1-201ENST00000569378 2000 ntBASIC21.43■■□□□ 1.02
TCF4P15884 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.43■■□□□ 1.02
TCF4P15884 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.43■■□□□ 1.02
TCF4P15884 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TCF4P15884 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TCF4P15884 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.43■■□□□ 1.02
TCF4P15884 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms