Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPARCP09486 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.28■□□□□ 0.52
SPARCP09486 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPARCP09486 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPARCP09486 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SPARCP09486 AC027702.1-201ENST00000563810 1770 ntBASIC18.27■□□□□ 0.52
SPARCP09486 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SPARCP09486 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.27■□□□□ 0.52
SPARCP09486 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SPARCP09486 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.27■□□□□ 0.52
SPARCP09486 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.27■□□□□ 0.52
SPARCP09486 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.27■□□□□ 0.52
SPARCP09486 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPARCP09486 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPARCP09486 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPARCP09486 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SPARCP09486 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.27■□□□□ 0.51
SPARCP09486 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPARCP09486 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 AC011484.1-201ENST00000377652 1995 ntBASIC18.26■□□□□ 0.51
SPARCP09486 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SPARCP09486 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.26■□□□□ 0.51
SPARCP09486 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPARCP09486 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SPARCP09486 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.26■□□□□ 0.51
SPARCP09486 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
SPARCP09486 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.25■□□□□ 0.51
SPARCP09486 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.25■□□□□ 0.51
SPARCP09486 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SPARCP09486 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.25■□□□□ 0.51
SPARCP09486 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 AC027612.3-201ENST00000413684 1047 ntBASIC18.25■□□□□ 0.51
SPARCP09486 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 AC120498.10-201ENST00000621827 505 ntBASIC18.25■□□□□ 0.51
SPARCP09486 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.25■□□□□ 0.51
SPARCP09486 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SPARCP09486 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPARCP09486 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.24■□□□□ 0.51
SPARCP09486 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SPARCP09486 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.24■□□□□ 0.51
SPARCP09486 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SPARCP09486 AC138907.5-202ENST00000569484 235 ntBASIC18.24■□□□□ 0.51
SPARCP09486 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 LINC02228-203ENST00000641970 1355 ntBASIC18.24■□□□□ 0.51
SPARCP09486 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
SPARCP09486 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.24■□□□□ 0.51
SPARCP09486 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SPARCP09486 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPARCP09486 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SPARCP09486 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPARCP09486 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPARCP09486 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SPARCP09486 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SPARCP09486 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPARCP09486 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPARCP09486 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPARCP09486 AC245052.3-201ENST00000450182 901 ntBASIC18.23■□□□□ 0.51
SPARCP09486 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms