Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
THBS1P07996 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.92■□□□□ 0.62
THBS1P07996 AC022517.1-201ENST00000592429 346 ntBASIC18.92■□□□□ 0.62
THBS1P07996 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.92■□□□□ 0.62
THBS1P07996 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
THBS1P07996 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
THBS1P07996 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
THBS1P07996 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
THBS1P07996 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
THBS1P07996 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.91■□□□□ 0.62
THBS1P07996 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
THBS1P07996 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
THBS1P07996 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
THBS1P07996 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
THBS1P07996 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.9■□□□□ 0.62
THBS1P07996 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
THBS1P07996 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 AC091799.1-201ENST00000422823 811 ntBASIC18.9■□□□□ 0.62
THBS1P07996 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.9■□□□□ 0.62
THBS1P07996 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.9■□□□□ 0.62
THBS1P07996 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.9■□□□□ 0.62
THBS1P07996 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.9■□□□□ 0.62
THBS1P07996 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
THBS1P07996 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.9■□□□□ 0.62
THBS1P07996 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS1P07996 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS1P07996 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS1P07996 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
THBS1P07996 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
THBS1P07996 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
THBS1P07996 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
THBS1P07996 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
THBS1P07996 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
THBS1P07996 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.89■□□□□ 0.61
THBS1P07996 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.89■□□□□ 0.61
THBS1P07996 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 KRT18P61-201ENST00000585825 1298 ntBASIC18.89■□□□□ 0.61
THBS1P07996 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.89■□□□□ 0.61
THBS1P07996 AC092437.1-201ENST00000624794 1048 ntBASIC18.89■□□□□ 0.61
THBS1P07996 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 MIR2861-201ENST00000636310 90 ntBASIC18.89■□□□□ 0.61
THBS1P07996 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
THBS1P07996 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
THBS1P07996 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.89■□□□□ 0.61
THBS1P07996 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
THBS1P07996 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
THBS1P07996 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
THBS1P07996 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
THBS1P07996 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms