Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 TSPY26P-201ENST00000476365 1326 ntBASIC18.6■□□□□ 0.57
HMGN1P05114 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.6■□□□□ 0.57
HMGN1P05114 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 AL512408.1-201ENST00000569378 2000 ntBASIC18.6■□□□□ 0.57
HMGN1P05114 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGN1P05114 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGN1P05114 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGN1P05114 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGN1P05114 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGN1P05114 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGN1P05114 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HMGN1P05114 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HMGN1P05114 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMGN1P05114 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGN1P05114 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.58■□□□□ 0.57
HMGN1P05114 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGN1P05114 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGN1P05114 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.58■□□□□ 0.56
HMGN1P05114 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGN1P05114 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 AC099791.1-201ENST00000416440 715 ntBASIC18.58■□□□□ 0.56
HMGN1P05114 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGN1P05114 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGN1P05114 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HMGN1P05114 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGN1P05114 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGN1P05114 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGN1P05114 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGN1P05114 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGN1P05114 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HMGN1P05114 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 MIR572-201ENST00000384983 95 ntBASIC18.57■□□□□ 0.56
HMGN1P05114 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.57■□□□□ 0.56
HMGN1P05114 AC027682.1-201ENST00000562846 899 ntBASIC18.57■□□□□ 0.56
HMGN1P05114 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HMGN1P05114 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGN1P05114 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 AC061975.6-201ENST00000579045 1553 ntBASIC18.56■□□□□ 0.56
HMGN1P05114 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HMGN1P05114 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGN1P05114 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGN1P05114 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
HMGN1P05114 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGN1P05114 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGN1P05114 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HMGN1P05114 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGN1P05114 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HMGN1P05114 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms