Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IFNA1P01562 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IFNA1P01562 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.3■□□□□ 0.2
IFNA1P01562 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.3■□□□□ 0.2
IFNA1P01562 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IFNA1P01562 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.3■□□□□ 0.2
IFNA1P01562 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.3■□□□□ 0.2
IFNA1P01562 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
IFNA1P01562 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.29■□□□□ 0.2
IFNA1P01562 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.29■□□□□ 0.2
IFNA1P01562 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
IFNA1P01562 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
IFNA1P01562 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.29■□□□□ 0.2
IFNA1P01562 AL031602.1-201ENST00000633169 911 ntBASIC16.29■□□□□ 0.2
IFNA1P01562 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
IFNA1P01562 AC099778.1-201ENST00000568593 1911 ntBASIC16.29■□□□□ 0.2
IFNA1P01562 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IFNA1P01562 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.29■□□□□ 0.2
IFNA1P01562 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.29■□□□□ 0.2
IFNA1P01562 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.28■□□□□ 0.2
IFNA1P01562 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.28■□□□□ 0.2
IFNA1P01562 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 AL512408.1-201ENST00000569378 2000 ntBASIC16.28■□□□□ 0.2
IFNA1P01562 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
IFNA1P01562 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.28■□□□□ 0.2
IFNA1P01562 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
IFNA1P01562 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IFNA1P01562 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IFNA1P01562 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
IFNA1P01562 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.27■□□□□ 0.2
IFNA1P01562 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
IFNA1P01562 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.27■□□□□ 0.2
IFNA1P01562 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.27■□□□□ 0.2
IFNA1P01562 TNXA-203ENST00000507684 2038 ntBASIC16.27■□□□□ 0.2
IFNA1P01562 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.27■□□□□ 0.19
IFNA1P01562 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFNA1P01562 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
IFNA1P01562 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IFNA1P01562 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IFNA1P01562 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
IFNA1P01562 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFNA1P01562 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IFNA1P01562 HTR7P1-202ENST00000624664 4411 ntBASIC16.27■□□□□ 0.19
IFNA1P01562 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
IFNA1P01562 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
IFNA1P01562 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IFNA1P01562 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IFNA1P01562 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFNA1P01562 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms