Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.02■□□□□ 0.96
TOP3BO95985 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TOP3BO95985 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.02■□□□□ 0.96
TOP3BO95985 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TOP3BO95985 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.02■□□□□ 0.96
TOP3BO95985 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.02■□□□□ 0.96
TOP3BO95985 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TOP3BO95985 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP3BO95985 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.02■□□□□ 0.96
TOP3BO95985 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP3BO95985 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP3BO95985 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TOP3BO95985 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TOP3BO95985 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TOP3BO95985 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
TOP3BO95985 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.01■□□□□ 0.95
TOP3BO95985 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.01■□□□□ 0.95
TOP3BO95985 AP006294.2-201ENST00000641667 209 ntBASIC21.01■□□□□ 0.95
TOP3BO95985 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TOP3BO95985 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP3BO95985 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 LINC01521-201ENST00000504184 1943 ntBASIC21■□□□□ 0.95
TOP3BO95985 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TOP3BO95985 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21■□□□□ 0.95
TOP3BO95985 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21■□□□□ 0.95
TOP3BO95985 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21■□□□□ 0.95
TOP3BO95985 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21■□□□□ 0.95
TOP3BO95985 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21■□□□□ 0.95
TOP3BO95985 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TOP3BO95985 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TOP3BO95985 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP3BO95985 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TOP3BO95985 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.99■□□□□ 0.95
TOP3BO95985 GCSHP5-201ENST00000443090 522 ntBASIC20.99■□□□□ 0.95
TOP3BO95985 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP3BO95985 AP006587.3-201ENST00000525742 1516 ntBASIC20.99■□□□□ 0.95
TOP3BO95985 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TOP3BO95985 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TOP3BO95985 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP3BO95985 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.98■□□□□ 0.95
TOP3BO95985 CNN2P6-201ENST00000439038 900 ntBASIC20.98■□□□□ 0.95
TOP3BO95985 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP3BO95985 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
TOP3BO95985 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TOP3BO95985 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TOP3BO95985 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
TOP3BO95985 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP3BO95985 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TOP3BO95985 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 AL158047.1-201ENST00000445918 881 ntBASIC20.97■□□□□ 0.95
TOP3BO95985 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.97■□□□□ 0.95
TOP3BO95985 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.97■□□□□ 0.95
TOP3BO95985 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.97■□□□□ 0.95
TOP3BO95985 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
TOP3BO95985 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TOP3BO95985 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP3BO95985 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms