Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SFT2D2O95562 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SFT2D2O95562 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SFT2D2O95562 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SFT2D2O95562 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SFT2D2O95562 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SFT2D2O95562 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.04■□□□□ 0.32
SFT2D2O95562 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SFT2D2O95562 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.04■□□□□ 0.32
SFT2D2O95562 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 AC011484.1-201ENST00000377652 1995 ntBASIC17.04■□□□□ 0.32
SFT2D2O95562 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SFT2D2O95562 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.03■□□□□ 0.32
SFT2D2O95562 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 BX005040.4-201ENST00000637145 1518 ntBASIC17.03■□□□□ 0.32
SFT2D2O95562 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SFT2D2O95562 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.03■□□□□ 0.32
SFT2D2O95562 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SFT2D2O95562 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.02■□□□□ 0.32
SFT2D2O95562 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.02■□□□□ 0.32
SFT2D2O95562 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SFT2D2O95562 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SFT2D2O95562 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.02■□□□□ 0.32
SFT2D2O95562 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.02■□□□□ 0.32
SFT2D2O95562 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SFT2D2O95562 AP005435.1-201ENST00000529293 1178 ntBASIC17.02■□□□□ 0.32
SFT2D2O95562 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SFT2D2O95562 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.02■□□□□ 0.32
SFT2D2O95562 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SFT2D2O95562 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SFT2D2O95562 AC125437.2-201ENST00000625180 2167 ntBASIC17.02■□□□□ 0.31
SFT2D2O95562 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SFT2D2O95562 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SFT2D2O95562 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SFT2D2O95562 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SFT2D2O95562 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.02■□□□□ 0.31
SFT2D2O95562 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.02■□□□□ 0.31
SFT2D2O95562 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SFT2D2O95562 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.01■□□□□ 0.31
SFT2D2O95562 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 AP000974.1-201ENST00000623909 2387 ntBASIC17.01■□□□□ 0.31
SFT2D2O95562 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFT2D2O95562 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 AL158211.5-201ENST00000623583 2518 ntBASIC17.01■□□□□ 0.31
SFT2D2O95562 TNXA-203ENST00000507684 2038 ntBASIC17.01■□□□□ 0.31
SFT2D2O95562 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
SFT2D2O95562 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SFT2D2O95562 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFT2D2O95562 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms