Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.88■□□□□ 0.93
PMPCBO75439 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 TERF1P5-201ENST00000477545 1207 ntBASIC20.88■□□□□ 0.93
PMPCBO75439 AC011767.1-201ENST00000617410 1153 ntBASIC20.88■□□□□ 0.93
PMPCBO75439 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PMPCBO75439 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 AL157384.1-201ENST00000445995 2473 ntBASIC20.88■□□□□ 0.93
PMPCBO75439 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.88■□□□□ 0.93
PMPCBO75439 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMPCBO75439 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.87■□□□□ 0.93
PMPCBO75439 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.87■□□□□ 0.93
PMPCBO75439 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.87■□□□□ 0.93
PMPCBO75439 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.87■□□□□ 0.93
PMPCBO75439 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.87■□□□□ 0.93
PMPCBO75439 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
PMPCBO75439 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PMPCBO75439 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMPCBO75439 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
PMPCBO75439 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.86■□□□□ 0.93
PMPCBO75439 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PMPCBO75439 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.86■□□□□ 0.93
PMPCBO75439 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PMPCBO75439 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.86■□□□□ 0.93
PMPCBO75439 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.86■□□□□ 0.93
PMPCBO75439 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMPCBO75439 FP700111.2-201ENST00000619190 1892 ntBASIC20.86■□□□□ 0.93
PMPCBO75439 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PMPCBO75439 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
PMPCBO75439 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PMPCBO75439 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.85■□□□□ 0.93
PMPCBO75439 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.85■□□□□ 0.93
PMPCBO75439 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.85■□□□□ 0.93
PMPCBO75439 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.85■□□□□ 0.93
PMPCBO75439 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.85■□□□□ 0.93
PMPCBO75439 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
PMPCBO75439 IKBKGP1-201ENST00000612193 1073 ntBASIC20.85■□□□□ 0.93
PMPCBO75439 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.85■□□□□ 0.93
PMPCBO75439 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMPCBO75439 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.84■□□□□ 0.93
PMPCBO75439 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.84■□□□□ 0.93
PMPCBO75439 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 AC007225.1-201ENST00000566331 1836 ntBASIC20.84■□□□□ 0.93
PMPCBO75439 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PMPCBO75439 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.84■□□□□ 0.93
PMPCBO75439 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.84■□□□□ 0.93
PMPCBO75439 BID-214ENST00000617586 542 ntTSL 5 BASIC20.84■□□□□ 0.93
PMPCBO75439 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMPCBO75439 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PMPCBO75439 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMPCBO75439 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PMPCBO75439 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms