Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.35■□□□□ 0.85
KLHL41O60662 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.35■□□□□ 0.85
KLHL41O60662 AP006587.3-201ENST00000525742 1516 ntBASIC20.35■□□□□ 0.85
KLHL41O60662 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
KLHL41O60662 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
KLHL41O60662 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.35■□□□□ 0.85
KLHL41O60662 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
KLHL41O60662 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHL41O60662 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.34■□□□□ 0.85
KLHL41O60662 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.34■□□□□ 0.85
KLHL41O60662 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.34■□□□□ 0.85
KLHL41O60662 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.34■□□□□ 0.85
KLHL41O60662 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.34■□□□□ 0.85
KLHL41O60662 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KLHL41O60662 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHL41O60662 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
KLHL41O60662 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
KLHL41O60662 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KLHL41O60662 AC004911.1-201ENST00000416316 871 ntBASIC20.33■□□□□ 0.85
KLHL41O60662 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.33■□□□□ 0.85
KLHL41O60662 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.33■□□□□ 0.85
KLHL41O60662 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KLHL41O60662 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KLHL41O60662 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.33■□□□□ 0.84
KLHL41O60662 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.33■□□□□ 0.84
KLHL41O60662 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.33■□□□□ 0.84
KLHL41O60662 AC027702.1-201ENST00000563810 1770 ntBASIC20.33■□□□□ 0.84
KLHL41O60662 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KLHL41O60662 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KLHL41O60662 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.33■□□□□ 0.84
KLHL41O60662 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.33■□□□□ 0.84
KLHL41O60662 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.32■□□□□ 0.84
KLHL41O60662 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KLHL41O60662 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KLHL41O60662 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHL41O60662 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHL41O60662 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.31■□□□□ 0.84
KLHL41O60662 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.31■□□□□ 0.84
KLHL41O60662 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KLHL41O60662 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHL41O60662 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.31■□□□□ 0.84
KLHL41O60662 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
KLHL41O60662 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms