Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PROM1O43490 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PROM1O43490 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PROM1O43490 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
PROM1O43490 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.5■□□□□ 0.71
PROM1O43490 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 DUX4L16-201ENST00000555130 1264 ntBASIC19.5■□□□□ 0.71
PROM1O43490 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PROM1O43490 BID-214ENST00000617586 542 ntTSL 5 BASIC19.5■□□□□ 0.71
PROM1O43490 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.5■□□□□ 0.71
PROM1O43490 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.5■□□□□ 0.71
PROM1O43490 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PROM1O43490 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.5■□□□□ 0.71
PROM1O43490 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PROM1O43490 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.49■□□□□ 0.71
PROM1O43490 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.49■□□□□ 0.71
PROM1O43490 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.49■□□□□ 0.71
PROM1O43490 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PROM1O43490 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.49■□□□□ 0.71
PROM1O43490 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.49■□□□□ 0.71
PROM1O43490 AC092437.1-201ENST00000624794 1048 ntBASIC19.49■□□□□ 0.71
PROM1O43490 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PROM1O43490 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
PROM1O43490 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.49■□□□□ 0.71
PROM1O43490 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PROM1O43490 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PROM1O43490 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
PROM1O43490 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PROM1O43490 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.48■□□□□ 0.71
PROM1O43490 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PROM1O43490 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 AC007322.4-201ENST00000509611 723 ntBASIC19.47■□□□□ 0.71
PROM1O43490 AL591742.1-201ENST00000604433 565 ntBASIC19.47■□□□□ 0.71
PROM1O43490 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.47■□□□□ 0.71
PROM1O43490 AC013268.1-206ENST00000638368 961 ntBASIC19.47■□□□□ 0.71
PROM1O43490 AC112229.1-201ENST00000639295 961 ntBASIC19.47■□□□□ 0.71
PROM1O43490 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PROM1O43490 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PROM1O43490 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.47■□□□□ 0.71
PROM1O43490 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
PROM1O43490 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PROM1O43490 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
PROM1O43490 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
PROM1O43490 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PROM1O43490 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PROM1O43490 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms