Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC010980.2-201ENST00000587099 1412 ntBASIC20.16■□□□□ 0.82
TMX2-CTNND1H3BSU7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMX2-CTNND1H3BSU7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMX2-CTNND1H3BSU7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 AP006294.2-201ENST00000641667 209 ntBASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMX2-CTNND1H3BSU7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC093827.2-201ENST00000512654 315 ntBASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC091874.3-201ENST00000512672 1195 ntBASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC007952.6-201ENST00000573168 2673 ntBASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC003957.1-201ENST00000625108 2673 ntBASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMX2-CTNND1H3BSU7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMX2-CTNND1H3BSU7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC087742.1-201ENST00000575880 1738 ntBASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 LSM12P1-201ENST00000411836 588 ntBASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.11■□□□□ 0.81
TMX2-CTNND1H3BSU7 AC083880.1-201ENST00000608266 535 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms