Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 AC112907.3-201ENST00000577781 2400 ntBASIC16.74■□□□□ 0.27
LINC00473A8K010 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC00473A8K010 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.74■□□□□ 0.27
LINC00473A8K010 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00473A8K010 LINC02228-203ENST00000641970 1355 ntBASIC16.74■□□□□ 0.27
LINC00473A8K010 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00473A8K010 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00473A8K010 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00473A8K010 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00473A8K010 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LINC00473A8K010 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00473A8K010 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 MIR638-201ENST00000385237 100 ntBASIC16.73■□□□□ 0.27
LINC00473A8K010 AC245052.3-201ENST00000450182 901 ntBASIC16.73■□□□□ 0.27
LINC00473A8K010 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.73■□□□□ 0.27
LINC00473A8K010 AC104187.1-201ENST00000607510 612 ntBASIC16.73■□□□□ 0.27
LINC00473A8K010 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.73■□□□□ 0.27
LINC00473A8K010 AC120498.10-201ENST00000621827 505 ntBASIC16.73■□□□□ 0.27
LINC00473A8K010 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LINC00473A8K010 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00473A8K010 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LINC00473A8K010 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00473A8K010 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LINC00473A8K010 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00473A8K010 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00473A8K010 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LINC00473A8K010 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.72■□□□□ 0.27
LINC00473A8K010 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 SLC7A5P2-201ENST00000553010 536 ntBASIC16.72■□□□□ 0.27
LINC00473A8K010 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LINC00473A8K010 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
LINC00473A8K010 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00473A8K010 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00473A8K010 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00473A8K010 AFG3L1P-217ENST00000557444 2447 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC00473A8K010 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00473A8K010 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00473A8K010 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC00473A8K010 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00473A8K010 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L2-201ENST00000561772 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L6-201ENST00000626483 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L1-201ENST00000627662 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L8-201ENST00000629013 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L3-201ENST00000630187 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L7-201ENST00000630678 1275 ntBASIC16.71■□□□□ 0.27
LINC00473A8K010 DUX4L5-201ENST00000630834 1275 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms