Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 AC010980.2-201ENST00000587099 1412 ntBASIC16.26■□□□□ 0.19
LINC01548A6NM66 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 MKRN4P-201ENST00000444706 1521 ntBASIC16.25■□□□□ 0.19
LINC01548A6NM66 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 AL512625.2-201ENST00000417533 625 ntBASIC16.25■□□□□ 0.19
LINC01548A6NM66 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 AL138781.1-201ENST00000566567 1274 ntBASIC16.25■□□□□ 0.19
LINC01548A6NM66 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 AC011484.1-201ENST00000377652 1995 ntBASIC16.25■□□□□ 0.19
LINC01548A6NM66 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.25■□□□□ 0.19
LINC01548A6NM66 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01548A6NM66 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01548A6NM66 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01548A6NM66 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01548A6NM66 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01548A6NM66 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.24■□□□□ 0.19
LINC01548A6NM66 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01548A6NM66 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01548A6NM66 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 AL355802.2-201ENST00000402069 882 ntBASIC16.23■□□□□ 0.19
LINC01548A6NM66 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC01548A6NM66 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01548A6NM66 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LINC01548A6NM66 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC01548A6NM66 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LINC01548A6NM66 SLC29A4P1-201ENST00000398760 971 ntBASIC16.22■□□□□ 0.19
LINC01548A6NM66 MIPEPP3-201ENST00000412105 444 ntBASIC16.22■□□□□ 0.19
LINC01548A6NM66 BX276092.2-201ENST00000417668 665 ntBASIC16.22■□□□□ 0.19
LINC01548A6NM66 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC01548A6NM66 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01548A6NM66 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01548A6NM66 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 AC098934.4-201ENST00000564127 592 ntBASIC16.21■□□□□ 0.19
LINC01548A6NM66 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01548A6NM66 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
LINC01548A6NM66 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.21■□□□□ 0.18
LINC01548A6NM66 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC01548A6NM66 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms