Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC162PA2VCL2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 AC010536.3-201ENST00000620306 533 ntBASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 AC092667.1-201ENST00000434301 2586 ntBASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC162PA2VCL2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 AC016769.1-201ENST00000409132 1010 ntBASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 KRT18P11-201ENST00000435214 1283 ntBASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 FP700111.2-201ENST00000619190 1892 ntBASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC162PA2VCL2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 AC006015.1-201ENST00000429970 570 ntBASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 TERF1P5-201ENST00000477545 1207 ntBASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 MFSD11-216ENST00000590393 1141 ntBASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC162PA2VCL2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 AC027702.1-201ENST00000563810 1770 ntBASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCDC162PA2VCL2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC162PA2VCL2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms