Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV2A0A0B4J234 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 CDV3P1-201ENST00000471403 739 ntBASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 AC022517.1-201ENST00000592429 346 ntBASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 BID-214ENST00000617586 542 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV2A0A0B4J234 AC011484.1-201ENST00000377652 1995 ntBASIC15.52■□□□□ 0.07
TRAV2A0A0B4J234 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV2A0A0B4J234 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV2A0A0B4J234 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRAV2A0A0B4J234 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV2A0A0B4J234 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 AC091799.1-201ENST00000422823 811 ntBASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 AC116050.2-201ENST00000612102 1779 ntBASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV2A0A0B4J234 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 MFSD11-216ENST00000590393 1141 ntBASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 AC121338.2-201ENST00000622535 1744 ntBASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 RNF165-205ENST00000588679 2904 ntBASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV2A0A0B4J234 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV2A0A0B4J234 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms