Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 AC098590.1-201ENST00000468126 897 ntBASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 AC244015.2-201ENST00000616358 1861 ntBASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV19A0A0A6YYK7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 AC093827.2-201ENST00000512654 315 ntBASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 AC073648.6-201ENST00000641589 218 ntBASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV19A0A0A6YYK7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRAV19A0A0A6YYK7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRAV19A0A0A6YYK7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.33■■□□□ 1
TRAV19A0A0A6YYK7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.33■■□□□ 1
TRAV19A0A0A6YYK7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 GCSHP5-201ENST00000443090 522 ntBASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 RPS2P52-201ENST00000469610 820 ntBASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 C2orf69P4-201ENST00000565394 541 ntBASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV19A0A0A6YYK7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AC012676.1-201ENST00000574705 1949 ntBASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 UNC93B4-201ENST00000505679 747 ntBASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 AC008403.3-201ENST00000598924 454 ntBASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV19A0A0A6YYK7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 AL158047.1-201ENST00000445918 881 ntBASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 AC142381.4-202ENST00000563973 229 ntBASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.3■■□□□ 1
TRAV19A0A0A6YYK7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms