Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC233300.1-201ENST00000624323 817 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 HIST1H4H-204ENST00000635491 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL021368.4-201ENST00000637710 675 ntTSL 3 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 OR10J1-202ENST00000641630 1089 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 IARS2P1-201ENST00000508226 3173 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 DTL-206ENST00000542077 4471 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 CUBNP1-201ENST00000412710 1790 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC110769.2-201ENST00000602760 1548 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 LINC02452-201ENST00000637833 2982 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 TRIM51JP-201ENST00000443564 1320 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 MIR646-201ENST00000385067 94 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 TPM3P1-201ENST00000413233 747 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 RPL10P11-201ENST00000414541 616 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 FAM192BP-201ENST00000414628 762 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 GACAT3-201ENST00000426539 1096 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC245036.2-201ENST00000433549 287 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC013474.1-201ENST00000440018 799 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC246785.1-201ENST00000440916 264 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 YWHABP1-201ENST00000445359 727 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL606462.1-201ENST00000447187 451 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 RN7SL334P-201ENST00000465067 279 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC078814.1-201ENST00000484568 645 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 COX17-203ENST00000484810 471 ntTSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 RPS2P45-202ENST00000490535 847 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 NR1I3-220ENST00000505005 985 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC109927.1-203ENST00000507038 421 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC083841.2-201ENST00000510610 602 ntTSL 4 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC025578.1-201ENST00000552027 543 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL354809.1-202ENST00000614005 640 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL354809.1-201ENST00000618106 716 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 NDUFA6-AS1-216ENST00000621190 766 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL139093.1-201ENST00000622029 1014 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL583859.3-201ENST00000623982 1068 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 OR55B1P-202ENST00000641245 1276 ntBASIC8.65□□□□□ -1.02
SNX18Q96RF0 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SNX18Q96RF0 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
SNX18Q96RF0 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.03
SNX18Q96RF0 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 MTFR1-201ENST00000262146 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SNX18Q96RF0 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.65□□□□□ -1.03
SNX18Q96RF0 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC8.65□□□□□ -1.03
SNX18Q96RF0 PLEKHA8P1-202ENST00000336399 1524 ntBASIC8.64□□□□□ -1.03
SNX18Q96RF0 LDHC-207ENST00000541669 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 TTC1-205ENST00000522793 1432 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SNX18Q96RF0 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SNX18Q96RF0 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms