Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 AC083880.1-201ENST00000608266 535 ntBASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 AC010980.2-201ENST00000587099 1412 ntBASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGA3Q9Y5H0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 AC073130.3-201ENST00000624389 2278 ntBASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA3Q9Y5H0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 AC091874.3-201ENST00000512672 1195 ntBASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA3Q9Y5H0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
PCDHGA3Q9Y5H0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA3Q9Y5H0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PRORSD1P-201ENST00000295112 541 ntBASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms