Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB9Q9Y5E1 MKRN4P-201ENST00000444706 1521 ntBASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB9Q9Y5E1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB9Q9Y5E1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 AL049796.1-201ENST00000565336 1766 ntBASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 AC008694.1-202ENST00000636953 945 ntBASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB9Q9Y5E1 PRORSD1P-201ENST00000295112 541 ntBASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 MIPEPP3-201ENST00000412105 444 ntBASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 AC091799.1-201ENST00000422823 811 ntBASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 AC007322.4-201ENST00000509611 723 ntBASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB9Q9Y5E1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB9Q9Y5E1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHB9Q9Y5E1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB9Q9Y5E1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB9Q9Y5E1 AC005229.4-201ENST00000610085 2198 ntBASIC20.89■□□□□ 0.94
PCDHB9Q9Y5E1 AC068338.2-201ENST00000563278 1430 ntBASIC20.89■□□□□ 0.94
PCDHB9Q9Y5E1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 AL591742.1-201ENST00000604433 565 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms