Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 TNXA-203ENST00000507684 2038 ntBASIC18.32■□□□□ 0.52
LSM2Q9Y333 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSM2Q9Y333 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LSM2Q9Y333 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LSM2Q9Y333 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 SLC47A1P1-202ENST00000449666 945 ntBASIC18.31■□□□□ 0.52
LSM2Q9Y333 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.31■□□□□ 0.52
LSM2Q9Y333 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSM2Q9Y333 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.3■□□□□ 0.52
LSM2Q9Y333 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSM2Q9Y333 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.3■□□□□ 0.52
LSM2Q9Y333 SYT6-210ENST00000641643 1587 ntBASIC18.3■□□□□ 0.52
LSM2Q9Y333 AC055733.4-201ENST00000638462 1354 ntBASIC18.3■□□□□ 0.52
LSM2Q9Y333 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.29■□□□□ 0.52
LSM2Q9Y333 AC092171.4-201ENST00000609130 632 ntBASIC18.29■□□□□ 0.52
LSM2Q9Y333 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.29■□□□□ 0.52
LSM2Q9Y333 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSM2Q9Y333 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LSM2Q9Y333 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM2Q9Y333 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.28■□□□□ 0.52
LSM2Q9Y333 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.27■□□□□ 0.52
LSM2Q9Y333 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM2Q9Y333 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
LSM2Q9Y333 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms