Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA6Q9UN73 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 FAM21FP-204ENST00000608637 956 ntBASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA6Q9UN73 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 AL355802.2-201ENST00000402069 882 ntBASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA6Q9UN73 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 SLC29A4P1-201ENST00000398760 971 ntBASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
PCDHA6Q9UN73 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 MKRN4P-201ENST00000444706 1521 ntBASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 AC007322.3-201ENST00000426526 701 ntBASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA6Q9UN73 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 AL138781.1-201ENST00000566567 1274 ntBASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 AC142086.2-201ENST00000569753 217 ntBASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA6Q9UN73 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 AC010980.2-201ENST00000587099 1412 ntBASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA6Q9UN73 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA6Q9UN73 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms