Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 AC005181.1-201ENST00000604782 1256 ntBASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT6Q9ULM6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT6Q9ULM6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
CNOT6Q9ULM6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT6Q9ULM6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 MIR663A-201ENST00000385250 93 ntBASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT6Q9ULM6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 AC091799.1-201ENST00000422823 811 ntBASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT6Q9ULM6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 NCF1B-203ENST00000435988 1254 ntBASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 AC006970.2-201ENST00000450065 779 ntBASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 AC245052.3-201ENST00000450182 901 ntBASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 AL121603.2-201ENST00000557373 2117 ntBASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNOT6Q9ULM6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CNOT6Q9ULM6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT6Q9ULM6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT6Q9ULM6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT6Q9ULM6 ID1-201ENST00000376105 1233 ntBASIC20.59■□□□□ 0.89
CNOT6Q9ULM6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.59■□□□□ 0.89
CNOT6Q9ULM6 AL591742.1-201ENST00000604433 565 ntBASIC20.59■□□□□ 0.89
CNOT6Q9ULM6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms