Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCM2LQ9NUG4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 AC087289.5-201ENST00000586076 3175 ntBASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 AC099778.1-201ENST00000568593 1911 ntBASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 SMG8-203ENST00000578922 2178 ntBASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCM2LQ9NUG4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 KRT18P5-201ENST00000436075 1291 ntBASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCM2LQ9NUG4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 AP006587.3-201ENST00000525742 1516 ntBASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCM2LQ9NUG4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 SLC47A1P1-202ENST00000449666 945 ntBASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCM2LQ9NUG4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms